ggKbase home page

SCNpilot_cont_300_bf_scaffold_1420

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1420_1
Hyphomicrobium sulfonivorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(556..1095)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036B8DB5
Putative flavin reductase {ECO:0000313|EMBL:ADL39576.1}; TaxID=121290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium s
GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1420_2
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1242..2771
DNA (1530bp) protein (510aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MGQ6_9BURK rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:GAN78018.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rub
acyl-CoA dehydrogenase domain-containing protein rbh
SCNpilot_cont_300_bf_scaffold_1420_3
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2795..3430
DNA (636bp) protein (212aa)
GTP cyclohydrolase II n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B733_9RHIZ
GTP cyclohydrolase II
GTP cyclohydrolase II {ECO:0000313|EMBL:AGK58012.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denit
SCNpilot_cont_300_bf_scaffold_1420_4
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3665..4300)
DNA (636bp) protein (212aa)
Putative transcriptional regulator n=1 Tax=Burkholderia terrae BS001 RepID=I5CSA9_9BURK
Transcriptional regulator {ECO:0000313|EMBL:GAN78017.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1420_5
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4676..5998
DNA (1323bp) protein (441aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IIT0_XANP2
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:GAN78018.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rub
acyl-CoA dehydrogenase domain-containing protein
SCNpilot_cont_300_bf_scaffold_1420_6
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

Not on your lists

6085..7359
DNA (1275bp) protein (425aa)
Fe-S oxidoreductase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6NB76_9ARCH
Fe-S oxidoreductase {ECO:0000313|EMBL:BAJ49582.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum
Fe-S oxidoreductase
SCNpilot_cont_300_bf_scaffold_1420_7
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

Not on your lists

7375..8202
DNA (828bp) protein (276aa)
Fe-S oxidoreductase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6NB76_9ARCH
Fe-S oxidoreductase {ECO:0000313|EMBL:BAJ49582.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum
Fe-S oxidoreductase
SCNpilot_cont_300_bf_scaffold_1420_8
Vulcanisaeta distributa, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

8199..9038
DNA (840bp) protein (280aa)
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QNX7_VULDI
electron transfer flavoprotein subunit alpha/beta
Electron transfer flavoprotein alpha/beta-subunit {ECO:0000313|EMBL:ADN51342.1}; TaxID=572478 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Vulcanisaeta.;" source="
SCNpilot_cont_300_bf_scaffold_1420_9
GWB2_Planctomycetes_41_19_curated, Brocadiales, Planctomycetes, Bacteria

Not on your lists

9038..10012
DNA (975bp) protein (325aa)
electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit Tax=GWB2_Planctomycetes_41_19_curated
Electron transfer flavoprotein alpha subunit id=5025649 bin=GWA2_Planctomycete_KSU_39_15 species=Thermoplasmatales archaeon SCGC AB-539-C06 genus=unknown taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
FixB; electron transfer flavoprotein, alpha subunit
SCNpilot_cont_300_bf_scaffold_1420_10
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10207..10587
DNA (381bp) protein (127aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J769_HYPSM
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
SCNpilot_cont_300_bf_scaffold_1420_11
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11369..12724
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JG68_HYPSM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCB66772.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp.
SCNpilot_cont_300_bf_scaffold_1420_12
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13093..13947
DNA (855bp) protein (285aa)
glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
Serine hydroxymethyltransferase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JUV8_HYPDA
Displaying 12 items

View Taxonomy