ggKbase home page

SCNpilot_cont_300_bf_scaffold_2926

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2926_1
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..177)
DNA (177bp) protein (59aa)
Polynucleotide adenylyltransferase region n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JSP0_HYPDA
polynucleotide adenylyltransferase region
Polynucleotide adenylyltransferase region {ECO:0000313|EMBL:ADJ24334.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="
SCNpilot_cont_300_bf_scaffold_2926_2
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181..477)
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JSN9_HYPDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ24333.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium den
SCNpilot_cont_300_bf_scaffold_2926_3
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(474..1130)
DNA (657bp) protein (219aa)
NUDIX hydrolase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JSN8_HYPDA rbh
NUDIX hydrolase rbh
NUDIX hydrolase {ECO:0000313|EMBL:ADJ24332.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrifica
SCNpilot_cont_300_bf_scaffold_2926_4
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1250..2482
DNA (1233bp) protein (411aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JSN7_HYPDA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADJ24331.1}; Flags: Precursor;; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source=
SCNpilot_cont_300_bf_scaffold_2926_5
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2512..3582)
DNA (1071bp) protein (357aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JSN6_HYPDA rbh
NADH:flavin oxidoreductase/NADH oxidase rbh
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:ADJ24330.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hy
SCNpilot_cont_300_bf_scaffold_2926_6
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3735..4910)
DNA (1176bp) protein (392aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JSN5_HYPDA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADJ24329.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium den
SCNpilot_cont_300_bf_scaffold_2926_7
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5141..5539)
DNA (399bp) protein (133aa)
coproporphyrinogen oxidase (EC:1.3.3.3)
Coproporphyrinogen-III oxidase, aerobic n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JSN4_HYPDA
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprop
SCNpilot_cont_300_bf_scaffold_2926_8
unknown

Not on your lists

5872..6030
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2926_9
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6143..8020
DNA (1878bp) protein (626aa)
ABC transporter related protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JSN3_HYPDA rbh
ABC transporter related protein {ECO:0000313|EMBL:ADJ24327.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicro
ABC transporter rbh
SCNpilot_cont_300_bf_scaffold_2926_10
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8034..8726)
DNA (693bp) protein (231aa)
CzcN domain-containing protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JSN2_HYPDA rbh
CzcN domain-containing protein rbh
CzcN domain-containing protein {ECO:0000313|EMBL:ADJ24326.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrob
SCNpilot_cont_300_bf_scaffold_2926_11
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8775..9251)
DNA (477bp) protein (159aa)
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-R
tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JSN1_HYPDA rbh
tRNA/rRNA methyltransferase SpoU rbh
SCNpilot_cont_300_bf_scaffold_2926_12
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9503..10075
DNA (573bp) protein (191aa)
ubiquinol-cytochrome C reductase, iron-sulfur subunit (EC:1.10.2.2) rbh
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria;
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JSN0_HYPDA rbh
SCNpilot_cont_300_bf_scaffold_2926_13
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10087..11400
DNA (1314bp) protein (438aa)
Cytochrome b n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JSM9_HYPDA rbh
cytochrome b/b6 domain-containing protein rbh
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrifican
SCNpilot_cont_300_bf_scaffold_2926_14
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11415..12278
DNA (864bp) protein (288aa)
Cytochrome c1 n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JSM8_HYPDA rbh
cytochrome C1 rbh
Cytochrome c1 {ECO:0000313|EMBL:ADJ24322.1}; Flags: Precursor;; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicr
SCNpilot_cont_300_bf_scaffold_2926_15
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12581..12970
DNA (390bp) protein (130aa)
S-methyl-5'-thioadenosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; EC=2.4.2.28 {ECO:0000256|HAMAP-Rule:MF_01963};; 5'-methylthioadenosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; TaxID
S-methyl-5'-thioadenosine phosphorylase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JSM7_HYPDA
methylthioadenosine phosphorylase
Displaying 15 items

View Taxonomy