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SCNpilot_cont_300_bf_scaffold_4862

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_4862_1
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..154
DNA (153bp) protein (51aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JQN7_HYPDA
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ADJ22039.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyph
SCNpilot_cont_300_bf_scaffold_4862_2
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

192..581
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JQB7_HYPDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ22038.1}; Flags: Precursor;; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source=
SCNpilot_cont_300_bf_scaffold_4862_3
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

682..1434
DNA (753bp) protein (251aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JQB6_HYPDA rbh
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADJ22037.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hy
SCNpilot_cont_300_bf_scaffold_4862_4
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1413..1949)
DNA (537bp) protein (179aa)
G:T/U mismatch-specific DNA glycosylase-like protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JQB5_HYPDA rbh
G:T/U mismatch-specific DNA glycosylase-like protein rbh
G:T/U mismatch-specific DNA glycosylase-like protein {ECO:0000313|EMBL:ADJ22036.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.
SCNpilot_cont_300_bf_scaffold_4862_5
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1956..2438)
DNA (483bp) protein (161aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JQB4_HYPDA rbh
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_4862_6
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2558..2986)
DNA (429bp) protein (143aa)
Ribosomal silencing factor RsfS n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JQB3_HYPDA
iojap-like protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphom
SCNpilot_cont_300_bf_scaffold_4862_7
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3131..3430)
DNA (300bp) protein (100aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244};
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JQB2_HYPDA
SCNpilot_cont_300_bf_scaffold_4862_8
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3412..3729)
DNA (318bp) protein (106aa)
nadD; nicotinic acid mononucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244};
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B8M4_9RHIZ
SCNpilot_cont_300_bf_scaffold_4862_9
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3754..5040)
DNA (1287bp) protein (429aa)
gamma-glutamyl phosphate reductase (EC:1.2.1.41) rbh
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:000
Gamma-glutamyl phosphate reductase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JQB1_HYPDA rbh
SCNpilot_cont_300_bf_scaffold_4862_10
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5043..6056)
DNA (1014bp) protein (338aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|H
Glutamate 5-kinase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JQB0_HYPDA rbh
glutamate 5-kinase
SCNpilot_cont_300_bf_scaffold_4862_11
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6295..7392)
DNA (1098bp) protein (366aa)
Sodium/calcium exchanger membrane region n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JQA9_HYPDA rbh
sodium/calcium exchanger membrane region rbh
Sodium/calcium exchanger membrane region {ECO:0000313|EMBL:ADJ22030.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="H
SCNpilot_cont_300_bf_scaffold_4862_12
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7478..8518)
DNA (1041bp) protein (347aa)
GTPase Obg n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JQA8_HYPDA rbh
GTP-binding protein Obg/CgtA rbh
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobia
SCNpilot_cont_300_bf_scaffold_4862_13
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8515..9036)
DNA (522bp) protein (174aa)
GCN5-related N-acetyltransferase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JQA7_HYPDA rbh
GCN5-like N-acetyltransferase rbh
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADJ22028.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicr
SCNpilot_cont_300_bf_scaffold_4862_14
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9149..9421)
DNA (273bp) protein (91aa)
50S ribosomal protein L27 n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JQA6_HYPDA
50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobi
SCNpilot_cont_300_bf_scaffold_4862_15
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9452..9766)
DNA (315bp) protein (105aa)
50S ribosomal protein L21 n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JQA5_HYPDA
50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomi
SCNpilot_cont_300_bf_scaffold_4862_16
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10085..10924
DNA (840bp) protein (280aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JQA4_HYPDA rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ22025.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium den
Displaying 16 items

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