ggKbase home page

SCNpilot_cont_300_bf_scaffold_12706

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_12706_1
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1764)
DNA (1764bp) protein (588aa)
ATP-dependent chaperone ClpB n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JYB9_HYPDA
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium de
ATP-dependent chaperone ClpB
SCNpilot_cont_300_bf_scaffold_12706_2
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2183..3067)
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JYB8_HYPDA rbh
Uncharacterized protein {ECO:0000313|EMBL:ADJ25322.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium den
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_12706_3
unknown

Not on your lists

3964..4266
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_12706_4
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4397..5476)
DNA (1080bp) protein (360aa)
Peptide chain release factor 1 n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JYB5_HYPDA rbh
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hypho
peptide chain release factor 1 rbh
SCNpilot_cont_300_bf_scaffold_12706_5
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5539..6252)
DNA (714bp) protein (238aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JYB4_HYPDA rbh
Uncharacterized protein {ECO:0000313|EMBL:ADJ25318.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium den
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_12706_6
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6340..6501)
DNA (162bp) protein (54aa)
PTSINtr with GAF domain, PtsP n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JYB3_HYPDA
PTSINtr with GAF domain, PtsP {ECO:0000313|EMBL:ADJ25317.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobi
PTSINtr with GAF domain, PtsP
SCNpilot_cont_300_bf_scaffold_12706_7
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6465..8585)
DNA (2121bp) protein (707aa)
PTSINtr with GAF domain, PtsP n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JYB3_HYPDA rbh
PTSINtr with GAF domain, PtsP {ECO:0000313|EMBL:ADJ25317.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobi
PTSINtr with GAF domain, PtsP rbh
SCNpilot_cont_300_bf_scaffold_12706_8
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8654..8854)
DNA (201bp) protein (67aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomi
Aspartokinase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JYB2_HYPDA
aspartate kinase
SCNpilot_cont_300_bf_scaffold_12706_9
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9202..9906
DNA (705bp) protein (235aa)
Integrase n=1 Tax=Rothia mucilaginosa (strain DY-18) RepID=D2NPN7_ROTMD
Uncharacterized protein {ECO:0000313|EMBL:ABA47958.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source
hypothetical protein
SCNpilot_cont_300_bf_scaffold_12706_10
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10049..10759
DNA (711bp) protein (237aa)
ubiquinone biosynthesis O-methyltransferase (EC:2.1.1.64) rbh
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JYB1_HYPDA rbh
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiqui
SCNpilot_cont_300_bf_scaffold_12706_11
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10789..11448
DNA (660bp) protein (220aa)
Rhomboid family protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JYB0_HYPDA rbh
Rhomboid family protein {ECO:0000313|EMBL:ADJ25314.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium den
rhomboid family protein rbh
SCNpilot_cont_300_bf_scaffold_12706_12
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11585..12595
DNA (1011bp) protein (337aa)
Acyltransferase 3 n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JYA9_HYPDA rbh
Acyltransferase 3 {ECO:0000313|EMBL:ADJ25313.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrifi
acyltransferase 3 rbh
Displaying 12 items

View Taxonomy