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SCNpilot_cont_300_bf_scaffold_4332

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_4332_1
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..250
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VYP7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJU12566.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4332_2
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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439..681
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035EA56F
XRE family transcriptional regulator {ECO:0000313|EMBL:EQB33893.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sp
XRE family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_4332_3
unknown

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comp(724..996)
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_4332_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1165..1824)
DNA (660bp) protein (220aa)
Uncharacterized protein {ECO:0000313|EMBL:KIZ39911.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
SCNpilot_cont_300_bf_scaffold_4332_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2089..2370
DNA (282bp) protein (94aa)
transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI000363ADD2
Transcriptional regulator {ECO:0000313|EMBL:KIZ34756.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
putative phage transcriptional regulator AlpA
SCNpilot_cont_300_bf_scaffold_4332_6
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2382..3269
DNA (888bp) protein (296aa)
RepA replication protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000370002A rbh
RepA replication protein {ECO:0000313|EMBL:KEQ52109.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlo
repA; replication protein A rbh
SCNpilot_cont_300_bf_scaffold_4332_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3478..4116
DNA (639bp) protein (213aa)
ParA n=1 Tax=Hoeflea sp. 108 RepID=UPI00036B2F4F rbh
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:KIZ40697.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodop
ParA-like protein
SCNpilot_cont_300_bf_scaffold_4332_8
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4113..4367
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8W3V3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJU15018.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4332_9
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4364..4882
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000382F04D rbh
Uncharacterized protein {ECO:0000313|EMBL:EJU15019.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4332_10
bacterium YEK0313, Bacteria

Not on your lists

4879..5400
DNA (522bp) protein (174aa)
Conjugal transfer protein TraF n=2 Tax=Sphingobium RepID=D4Z954_SPHJU
Peptidase S26 {ECO:0000313|EMBL:CEJ11248.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
traF; conjugal transfer protein TraF
SCNpilot_cont_300_bf_scaffold_4332_11
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5413..5760
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000374F9F7
Uncharacterized protein {ECO:0000313|EMBL:EJU15021.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4332_12
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5764..6525
DNA (762bp) protein (254aa)
Lytic transglycosylase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VQK4_9SPHN rbh
Lytic transglycosylase {ECO:0000313|EMBL:EJU15022.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp.
lytic transglycosylase catalytic
SCNpilot_cont_300_bf_scaffold_4332_13
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6770..7987
DNA (1218bp) protein (406aa)
type VI secretion protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037740F8
Uncharacterized protein {ECO:0000313|EMBL:EJU15023.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
Displaying 13 items

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