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SCNpilot_cont_300_bf_scaffold_4096_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_4096_curated_1
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..663
DNA (663bp) protein (221aa)
Outer membrane protein and related peptidoglycan-associated protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FW25_PHAMO
Outer membrane protein and related peptidoglycan-associated protein {ECO:0000313|EMBL:CCG42563.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
putative outer membrane protein
SCNpilot_cont_300_bf_scaffold_4096_curated_2
unknown

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comp(794..1255)
DNA (462bp) protein (154aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_4096_curated_3
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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1365..2435
DNA (1071bp) protein (357aa)
Tryptophan 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Short=TDO {ECO:0000256|HAMAP-Rule:MF_01972};; EC=1.13.11.11 {ECO:0000256|HAMAP-Rule:MF_01972};; Tryptamin 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan oxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan pyrrolase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophanase {ECO:0000256|HAMAP-Rule:MF_01972}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Ni
tryptophan 2,3-dioxygenase; K00453 tryptophan 2,3-dioxygenase [EC:1.13.11.11]
Tryptophan 2,3-dioxygenase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BV38_9GAMM
SCNpilot_cont_300_bf_scaffold_4096_curated_4
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2435..3652
DNA (1218bp) protein (406aa)
CoA transferase n=1 Tax=Pseudomonas thermotolerans RepID=UPI00037D18A8
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:EKV27348.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
L-carnitine dehydratase/bile acid-inducible protein F
SCNpilot_cont_300_bf_scaffold_4096_curated_5
unknown

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3746..4096
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_4096_curated_6
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4228..5253
DNA (1026bp) protein (342aa)
Aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000313|EMBL:CCJ08673.1}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000313|EMBL:CCJ08673.1};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strai
Aspartate-semialdehyde dehydrogenase n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QSW2_METSZ
SCNpilot_cont_300_bf_scaffold_4096_curated_7
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5692..5901
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) RepID=B1XQY1_SYNP2
hypothetical protein
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
SCNpilot_cont_300_bf_scaffold_4096_curated_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5898..6398
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VHC6_RHOPX
Uncharacterized protein {ECO:0000313|EMBL:KIZ41177.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4096_curated_9
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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6404..7468
DNA (1065bp) protein (355aa)
Patatin n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GTI8_THISH
Patatin
Patatin {ECO:0000313|EMBL:ACL71248.1}; Flags: Precursor;; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
Displaying 9 items

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