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SCNpilot_cont_300_bf_scaffold_2491_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2491_curated_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(3..587)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AP14_AZOBR
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
SCNpilot_cont_300_bf_scaffold_2491_curated_2
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(569..1576)
DNA (1008bp) protein (336aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-]
ATPase associated with various cellular activities AAA_3 n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A4B9_STAND
ATPase associated with various cellular activities AAA_3 {ECO:0000313|EMBL:ADH89782.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_300_bf_scaffold_2491_curated_3
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1737..2369
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Pseudomonas stutzeri RepID=UPI0002DA309B
hypothetical protein; K09986 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ05870.1}; TaxID=96563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM; 5965 / LMG 11199 / NCIMB 11358 / Stanier 221).;"
SCNpilot_cont_300_bf_scaffold_2491_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2366..3028
DNA (663bp) protein (221aa)
NUDIX hydrolase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVB7_PARL1
NUDIX hydrolase {ECO:0000313|EMBL:KFC66698.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
NUDIX hydrolase
SCNpilot_cont_300_bf_scaffold_2491_curated_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3160..4365)
DNA (1206bp) protein (402aa)
Uncharacterized protein {ECO:0000313|EMBL:CEG08948.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCNpilot_cont_300_bf_scaffold_2491_curated_6
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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5104..5439
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000382675C
Uncharacterized protein {ECO:0000313|EMBL:CDO61191.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2491_curated_7
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5455..6090)
DNA (636bp) protein (212aa)
Integral membrane protein TerC n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZCZ9_AZOL4
integral membrane protein TerC
Integral membrane protein TerC {ECO:0000313|EMBL:CBS89767.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
SCNpilot_cont_300_bf_scaffold_2491_curated_8
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6139..7005)
DNA (867bp) protein (289aa)
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coproporphyrinogenase {ECO:0000256|HAMAP-Rule:MF_00333};; EC=1.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00333};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
Coproporphyrinogen-III oxidase, aerobic n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AP20_AZOBR
hemF; coproporphyrinogen III oxidase
SCNpilot_cont_300_bf_scaffold_2491_curated_9
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7002..7454)
DNA (453bp) protein (151aa)
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TVH7_TISMK
yibK; putative aminotransferase/methyltransferase
SCNpilot_cont_300_bf_scaffold_2491_curated_10
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7812..8207
DNA (396bp) protein (132aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
fbcF; ubiquinol-cytochrome c reductase iron-sulfur subunit; K00411 ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:1.10.2.2]
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HSQ2_9RHIZ
SCNpilot_cont_300_bf_scaffold_2491_curated_11
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8220..9503
DNA (1284bp) protein (428aa)
Cytochrome b n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVC4_PARL1
cytochrome b/b6 domain-containing protein
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_300_bf_scaffold_2491_curated_12
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9515..10315
DNA (801bp) protein (267aa)
Cytochrome b n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HNH6_9BRAD
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
cytochrome b/c1; K00410 ubiquinol-cytochrome c reductase cytochrome b/c1 subunit
SCNpilot_cont_300_bf_scaffold_2491_curated_13
unknown

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comp(10491..10724)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2491_curated_14
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10930..11061
DNA (132bp) protein (44aa)
5'-methylthioadenosine phosphorylase (EC:2.4.2.28); K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
S-methyl-5'-thioadenosine phosphorylase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IBU4_BEII9
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Displaying 14 items

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