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SCNpilot_cont_300_bf_scaffold_1961_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1961_curated_1
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1052)
DNA (1050bp) protein (350aa)
UPI0003CE9DE7 related cluster n=1 Tax=unknown RepID=UPI0003CE9DE7
Subunit S of type I restriction-modification system {ECO:0000313|EMBL:ESY87516.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
restriction modification system DNA specificity domain-containing protein
SCNpilot_cont_300_bf_scaffold_1961_curated_2
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1049..2506)
DNA (1458bp) protein (486aa)
N-6 DNA methylase (EC:2.1.1.72); K03427 type I restriction enzyme M protein [EC:2.1.1.72]
N-6 DNA methylase {ECO:0000313|EMBL:ABA04515.1}; EC=2.1.1.72 {ECO:0000313|EMBL:ABA04515.1};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
N-6 DNA methylase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3ST76_NITWN
SCNpilot_cont_300_bf_scaffold_1961_curated_3
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2510..4957)
DNA (2448bp) protein (816aa)
Helicase, type I site-specific restriction-modification system restriction subunit n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GZK6_9GAMM
helicase, type I site-specific restriction-modification system restriction subunit
Helicase, type I site-specific restriction-modification system restriction subunit {ECO:0000313|EMBL:AGA90749.1}; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
SCNpilot_cont_300_bf_scaffold_1961_curated_4
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5150..5326)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WYM3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ34919.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_300_bf_scaffold_1961_curated_5
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5268..5936)
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3ST73_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA04518.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_300_bf_scaffold_1961_curated_6
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5933..6199)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WYL6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ34921.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_300_bf_scaffold_1961_curated_7
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6405..8366)
DNA (1962bp) protein (654aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WYL7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ34922.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1961_curated_8
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8363..9259)
DNA (897bp) protein (299aa)
Virulence-associated protein E n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WYL8_9BRAD
Virulence-associated protein E {ECO:0000313|EMBL:EAQ34923.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
virulence-associated protein E
SCNpilot_cont_300_bf_scaffold_1961_curated_9
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9249..9488)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WYL9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ34924.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1961_curated_10
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9622..9843)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WYL0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ34925.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_300_bf_scaffold_1961_curated_11
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9836..10102)
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3ST69_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA04522.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_300_bf_scaffold_1961_curated_12
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10128..10880)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WYL2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ34927.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1961_curated_13
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10926..11279)
DNA (354bp) protein (118aa)
Transcriptional regulator, XRE family n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3ST67_NITWN
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABA04524.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_300_bf_scaffold_1961_curated_14
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11608..12918)
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00035D0BA9
Uncharacterized protein {ECO:0000313|EMBL:KGB58938.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1961_curated_15
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13087..14730
DNA (1644bp) protein (548aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
carboxylesterase n=1 Tax=Maricaulis sp. JL2009 RepID=UPI00039B98E7
carboxylesterase type B
SCNpilot_cont_300_bf_scaffold_1961_curated_16
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14941..16089
DNA (1149bp) protein (383aa)
Major facilitator superfamily MFS_1 n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SWT1_CAUSK
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABZ73139.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_1961_curated_17
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16770..17744
DNA (975bp) protein (325aa)
carboxylesterase type B; K03929 para-nitrobenzyl esterase [EC:3.1.1.-]
Carboxylic ester hydrolase; EC=3.1.1.-;; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
Carboxylesterase type B n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T1V8_CAUSK
SCNpilot_cont_300_bf_scaffold_1961_curated_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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18168..18662
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GN48_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN93530.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_cont_300_bf_scaffold_1961_curated_19
Asticcacaulis biprosthecium, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18812..21055
DNA (2244bp) protein (748aa)
beta-mannosidase (EC:3.2.1.25); K01192 beta-mannosidase [EC:3.2.1.25]
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QML5_9CAUL
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EGF91456.1}; TaxID=715226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis biprosthecum C19.;"
SCNpilot_cont_300_bf_scaffold_1961_curated_20
Asticcacaulis sp. AC460, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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21083..21295
DNA (213bp) protein (71aa)
Beta-mannosidase n=1 Tax=Asticcacaulis sp. AC460 RepID=V4PT39_9CAUL
Beta-mannosidase {ECO:0000313|EMBL:ESQ91501.1}; TaxID=1282360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC460.;"
Displaying 20 items

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