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SCNpilot_cont_300_bf_scaffold_7354_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_7354_curated_1
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..658)
DNA (657bp) protein (219aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Methylopila sp. M107 RepID=UPI000370A39A
SCNpilot_cont_300_bf_scaffold_7354_curated_2
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(669..1802)
DNA (1134bp) protein (378aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
tktB; transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1]
Transketolase n=3 Tax=Ochrobactrum intermedium RepID=C4WHY3_9RHIZ
SCNpilot_cont_300_bf_scaffold_7354_curated_3
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2089..2826
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y149_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EGY00759.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
SCNpilot_cont_300_bf_scaffold_7354_curated_4
unknown

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2926..3216
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_7354_curated_5
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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3232..3597
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUZ1_PARL1
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein; K09888 cell division protein ZapA
SCNpilot_cont_300_bf_scaffold_7354_curated_6
unknown

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3662..3841
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_7354_curated_7
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3949..4524
DNA (576bp) protein (192aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
Antifreeze protein, type I : 5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FNW0_PHAMO
SCNpilot_cont_300_bf_scaffold_7354_curated_8
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4497..5189)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI0003736C8A
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:KDR43211.1}; Uncharacterized protein {ECO:0000313|EMBL:CDY79303.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
isoprenylcysteine carboxyl methyltransferase
SCNpilot_cont_300_bf_scaffold_7354_curated_9
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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5217..5969
DNA (753bp) protein (251aa)
Metallophosphoesterase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUZ3_PARL1
FIG006542: Phosphoesterase {ECO:0000313|EMBL:CDO58913.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
metallophosphoesterase; K09769 hypothetical protein
SCNpilot_cont_300_bf_scaffold_7354_curated_10
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6142..7002)
DNA (861bp) protein (287aa)
haloalkane dehalogenase (EC:3.8.1.5); K01563 haloalkane dehalogenase [EC:3.8.1.5]
UPI0003D03EF1 related cluster n=1 Tax=unknown RepID=UPI0003D03EF1
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCNpilot_cont_300_bf_scaffold_7354_curated_11
unknown

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comp(7159..7245)
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 11 items

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