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SCNpilot_cont_300_bf_scaffold_8456_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_6

near complete RP 45 / 55 BSCG 43 / 51 MC: 1 ASCG 10 / 38
Location: 1356..1604

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00036B5510 similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 81.0
  • Bit_score: 130
  • Evalue 8.80e-28
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 80.0
  • Bit_score: 131
  • Evalue 7.20e-28
hfq; RNA-binding protein Hfq; K03666 host factor-I protein similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 74.0
  • Bit_score: 123
  • Evalue 3.40e-26

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Taxonomy

alpha proteobacterium U9-1i → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 249
ATGAGCGAAAAACAACAAAATCTCCAGGACACGTTCCTCAACGCGGTCCGCAAGAGCAAATCAGCCGTGACGATTTTTCTCGTCAACGGCGTCAAGCTTCAGGGAAACATCACTTGGTTCGACAATTTTTGCGTTCTCCTGCGCCGGGATGGGCAGGCGCGACTCGTCTACGAACACGCGATCTCGACAGTCATGCCGCTGGGCCCGATCCAGTTGCAGGACGTGGAAACGGCGGCCGAGGGCGCCTGA
PROTEIN sequence
Length: 83
MSEKQQNLQDTFLNAVRKSKSAVTIFLVNGVKLQGNITWFDNFCVLLRRDGQARLVYEHAISTVMPLGPIQLQDVETAAEGA*