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SCNpilot_cont_300_bf_scaffold_8456_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_8456_curated_1
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..350
DNA (348bp) protein (116aa)
ATPase AAA n=1 Tax=Kaistia granuli RepID=UPI00036F3E7D
Fis family two component sigma-54 specific transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ADJ23494.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_cont_300_bf_scaffold_8456_curated_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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361..1266
DNA (906bp) protein (302aa)
class IV aminotransferase; K00824 D-alanine transaminase [EC:2.6.1.21]
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000372562B
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_8456_curated_3
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

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1356..1604
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00036B5510
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
hfq; RNA-binding protein Hfq; K03666 host factor-I protein
SCNpilot_cont_300_bf_scaffold_8456_curated_4
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1625..2929
DNA (1305bp) protein (435aa)
GTPase HflX n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZL0_9PROT
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
hflX; GTP-binding protein hflX; K03665 GTP-binding protein HflX
SCNpilot_cont_300_bf_scaffold_8456_curated_5
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2976..3824)
DNA (849bp) protein (283aa)
mazG; nucleoside triphosphate pyrophosphohydrolase (EC:3.6.1.19); K04765 ATP diphosphatase [EC:3.6.1.8]
Nucleoside triphosphate pyrophosphohydrolase n=1 Tax=Citreicella sp. SE45 RepID=D0D2G9_9RHOB
Nucleoside triphosphate pyrophosphohydrolase {ECO:0000313|EMBL:EEX14940.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. SE45.;"
SCNpilot_cont_300_bf_scaffold_8456_curated_6
unknown

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4082..4276
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_8456_curated_7
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4296..4715)
DNA (420bp) protein (140aa)
ComA n=1 Tax=Deinococcus wulumuqiensis RepID=UPI00034AE5C8
Putative thioesterase family protein {ECO:0000313|EMBL:KFC73034.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_8456_curated_8
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4743..5516)
DNA (774bp) protein (258aa)
Beta-lactamase-like protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXT9_PARL1
Beta-lactamase-like protein {ECO:0000313|EMBL:GAK46751.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
beta-lactamase-like protein; K06167 PhnP protein
Displaying 8 items

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