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SCNpilot_cont_300_bf_scaffold_2254_curated_8

Organism: scnpilot_dereplicated_Alphaproteobacteria_6

near complete RP 45 / 55 BSCG 43 / 51 MC: 1 ASCG 10 / 38
Location: comp(3752..4672)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMM8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 291.0
  • Bit_score: 271
  • Evalue 1.20e-69
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EIM25220.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.8
  • Coverage: 291.0
  • Bit_score: 271
  • Evalue 1.70e-69
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 299.0
  • Bit_score: 264
  • Evalue 4.50e-68

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 921
ATGGATGACGCCACTACCCGCTTCGCCGAGGTCCGGCCGCATCTTCTCGGCCTCGCCTATCGTATGCTGGGTGAAATGTCGGGCGCGGAAGATATCGTGCAGGAAGCCTGGCTGCGCTGGCACCGCCAGGATACGCACGTCGTCCGCGATGCACGCGCATGGCTTTCCGCCGTCACCATCCGGCTTGCGCTCGATACCCTGCGGTCGGCGCGCTCGAAACGGGAGACCTATGTCGGACCGTGGTTGCCCGAACCGCTGATGCCGGATGATATGCGCACATTGTCCACCACTGATCCGGCCGCACACGCCGAACTGGCATCGGATTTGTCGCTCGCCCTGCTGCACACGATGGAACGGCTGTCGCCGGAAGAACGCGCGGCCCTCATCCTGCATGACGCATTCGATTGCGAATACGCCGAAATCGCCGCCATGCTGGACAAGACGGAAGCCGCCTGCCGCAAGCTCGTCTCCCGCGCGCGGGAGCGGGTGAAGGCCGACCGCCCGCGCTACACCGTTTCCCGGCAGCAACACGAGCAGATGCTGGCGCGCTTCGCGCAAGCCGTCACGACCGGCAATACGGCGGAACTGGGCGCATTGTTTGCCGACGATGTGGTGTTCTATTCCGATGGTGGCGGCCATGTATCGGCTGCGCGCAATCCGGTATTCGGCATCGACCGCGTCACGCGGCTGATTGCCGGTCTGTGGCGGAAATTCTATGGCCTCGCGCCGGTCCGCCTCACCGCGACAGAGATCAACGGCCAGCCCAGCATCCTGATCACGGGCGGCGATCAGGTGGTCTCGACCATGACCATTGAATGCGAAGACGGGCGTATCACCGCGCTTTACGTGATGCGCAACCCCGAAAAGCTGACCCGGATTCTGCGCGCGGTTACGACGCACCCTTCTGGTGTAACCACATAG
PROTEIN sequence
Length: 307
MDDATTRFAEVRPHLLGLAYRMLGEMSGAEDIVQEAWLRWHRQDTHVVRDARAWLSAVTIRLALDTLRSARSKRETYVGPWLPEPLMPDDMRTLSTTDPAAHAELASDLSLALLHTMERLSPEERAALILHDAFDCEYAEIAAMLDKTEAACRKLVSRARERVKADRPRYTVSRQQHEQMLARFAQAVTTGNTAELGALFADDVVFYSDGGGHVSAARNPVFGIDRVTRLIAGLWRKFYGLAPVRLTATEINGQPSILITGGDQVVSTMTIECEDGRITALYVMRNPEKLTRILRAVTTHPSGVTT*