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SCNpilot_cont_300_bf_scaffold_2067_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2067_curated_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..981
DNA (981bp) protein (327aa)
Methionine import ATP-binding protein MetN {ECO:0000255|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000255|HAMAP-Rule:MF_01719};; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
Methionine import ATP-binding protein MetN n=2 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=METN_RHOPS
metN; DL-methionine transporter ATP-binding subunit; K02071 D-methionine transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_2067_curated_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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971..1636
DNA (666bp) protein (222aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q134P0_RHOPS
binding-protein-dependent transport systems inner membrane component; K02072 D-methionine transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABE40449.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_300_bf_scaffold_2067_curated_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1666..2457
DNA (792bp) protein (264aa)
Lipoprotein YaeC n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q134P1_RHOPS
lipoprotein YaeC; K02073 D-methionine transport system substrate-binding protein
Lipoprotein YaeC {ECO:0000313|EMBL:ABE40448.1}; Flags: Precursor;; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_300_bf_scaffold_2067_curated_4
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2501..3301
DNA (801bp) protein (267aa)
Lipoprotein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IED3_XANP2
NLPA lipoprotein; K02073 D-methionine transport system substrate-binding protein
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_300_bf_scaffold_2067_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3587..4060)
DNA (474bp) protein (158aa)
SsrA-binding protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NHK6_AFIFE
smpB; SsrA-binding protein; K03664 SsrA-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2067_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4113..4991)
DNA (879bp) protein (293aa)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U1M6_9PROT
dapA; dihydrodipicolinate synthase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2067_curated_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5102..7366
DNA (2265bp) protein (755aa)
hypothetical protein; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-]
Lytic murein transglycosylase family protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JR34_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2067_curated_8
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7373..9256)
DNA (1884bp) protein (628aa)
ATPase component of various ABC-type transport systems with duplicated ATPase domain n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YA13_9BRAD
ATPase component of various ABC-type transport systems with duplicated ATPase domain {ECO:0000313|EMBL:EHR05210.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein rbh
SCNpilot_cont_300_bf_scaffold_2067_curated_9
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9295..10977)
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3RC67_CUPTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ72492.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
SCNpilot_cont_300_bf_scaffold_2067_curated_10
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11027..12265)
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Pseudomonas thermotolerans RepID=UPI00037F000A
putative Acyl-CoA dehydrogenase
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:CAK03967.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
SCNpilot_cont_300_bf_scaffold_2067_curated_11
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12312..13154)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Y1N7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EMS41082.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein
SCNpilot_cont_300_bf_scaffold_2067_curated_12
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13151..14128)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7XTY7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EMS41083.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
peptide/nickel transport system permease protein; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_300_bf_scaffold_2067_curated_13
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14142..15728)
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7YX86_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EMS41084.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_2067_curated_14
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15757..16284)
DNA (528bp) protein (176aa)
Putative dehydrogenase n=1 Tax=Pseudomonas fluorescens (strain SBW25) RepID=C3K7U0_PSEFS
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:KCB39591.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
putative dehydrogenase
Displaying 14 items

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