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SCNpilot_cont_300_bf_scaffold_1760_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1760_curated_1
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..850
DNA (849bp) protein (283aa)
cysteine synthase; K01738 cysteine synthase A [EC:2.5.1.47] rbh
UPI0003CEE068 related cluster n=1 Tax=unknown RepID=UPI0003CEE068
Cysteine synthase {ECO:0000313|EMBL:KFG69431.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
SCNpilot_cont_300_bf_scaffold_1760_curated_2
unknown

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1097..1447
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1760_curated_3
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1496..2437)
DNA (942bp) protein (314aa)
Alpha/beta hydrolase fold-3 domain protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A2F8_STAND
alpha/beta hydrolase
Alpha/beta hydrolase fold-3 domain protein {ECO:0000313|EMBL:ADH89621.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_300_bf_scaffold_1760_curated_4
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2559..3479)
DNA (921bp) protein (307aa)
Transcriptional regulator, LysR family id=2984543 bin=GWF1_Rhodobacteraceae_65_7 species=Paracoccus denitrificans genus=Paracoccus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
LysR family transcriptional regulator
Tax=GWF1_Rhodobacteraceae_65_7_curated
SCNpilot_cont_300_bf_scaffold_1760_curated_5
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

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3624..5132
DNA (1509bp) protein (503aa)
sulfatase family protein 12 (EC:3.1.6.-)
Sulfatase family protein 12 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HLK0_ACHXA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
SCNpilot_cont_300_bf_scaffold_1760_curated_6
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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5135..6121
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00037857C1
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
SCNpilot_cont_300_bf_scaffold_1760_curated_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6170..6811)
DNA (642bp) protein (214aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I0B7_RHOVT
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1760_curated_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6843..8999)
DNA (2157bp) protein (719aa)
Thiol:disulfide interchange protein DsbD, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRI6_RHOCS
dsbD; thiol:disulfide interchange protein DsbD
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1760_curated_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9132..10355
DNA (1224bp) protein (408aa)
amaB; N-carbamoyl-L-amino acid hydrolase AmaB (EC:3.5.1.87); K06016 N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.87]
Beta-ureidopropionase n=1 Tax=Rhodovulum sp. PH10 RepID=J6J2F0_9RHOB
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1760_curated_10
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10335..11624)
DNA (1290bp) protein (430aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Curvibacter lanceolatus RepID=UPI000368FA9C
Membrane protein {ECO:0000313|EMBL:AIR53792.1}; TRAP dicarboxylate transporter {ECO:0000313|EMBL:EFV85817.1}; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans C54.;"
TRAP-type C4-dicarboxylate transport system,large permease component
SCNpilot_cont_300_bf_scaffold_1760_curated_11
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11643..12140)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DN45_BRAJP
dicarboxylatetransporter; hypothetical protein
C4-dicarboxylate transport system {ECO:0000313|EMBL:AHY53126.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
SCNpilot_cont_300_bf_scaffold_1760_curated_12
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12145..13113)
DNA (969bp) protein (323aa)
Putative TRAP-type C4-dicarboxylate transport system, binding periplasmic protein (DctP subunit) n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SAT4_9BRAD
Putative TRAP-type C4-dicarboxylate transport system, binding periplasmic protein (DctP subunit) {ECO:0000313|EMBL:CCD91311.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
dicarboxylate transporter DctP rbh
SCNpilot_cont_300_bf_scaffold_1760_curated_13
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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13182..13937
DNA (756bp) protein (252aa)
FCD domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RQN2_9PROT
FCD domain protein {ECO:0000313|EMBL:EFH10388.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1760_curated_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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13924..14745
DNA (822bp) protein (274aa)
UDP-glucose 4-epimerase n=1 Tax=Bradyrhizobium elkanii RepID=UPI000367D357
putative UDP-glucose 4-epimerase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1760_curated_15
CG_Mariprof_04, Zetaproteobacteria, Proteobacteria, Bacteria

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14788..17193
DNA (2406bp) protein (802aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C501_NITHN
hypothetical protein
Tax=CG_Mariprof_04
Displaying 15 items

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