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SCNpilot_cont_300_bf_scaffold_637_curated

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_637_curated_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52..1665)
DNA (1614bp) protein (538aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI00035D847C
short-chain amide or branched-chain amino acid ABC transporter; permease component
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_637_curated_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1774..3069)
DNA (1296bp) protein (432aa)
Branched-chain amino acid transport system substrate-binding protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NYS4_AZOS1
livK; branched-chain amino acid transport system substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_637_curated_3
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(3163..3741)
DNA (579bp) protein (193aa)
Hydrogenase/urease accessory protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AR25_9BACT
Hydrogenase/urease accessory protein {ECO:0000313|EMBL:EIP97466.1}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
ureJ; urease accessory UreJ transmembrane protein; K03192 urease accessory protein
SCNpilot_cont_300_bf_scaffold_637_curated_4
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3783..4409)
DNA (627bp) protein (209aa)
Urease accessory protein UreG n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8TAH5_9GAMM
Urease accessory protein UreG {ECO:0000256|HAMAP-Rule:MF_01389}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
urease accessory protein UreG
SCNpilot_cont_300_bf_scaffold_637_curated_5
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4406..4834)
DNA (429bp) protein (143aa)
UPI0003CE89D9 related cluster n=1 Tax=unknown RepID=UPI0003CE89D9
Uncharacterized protein {ECO:0000313|EMBL:ESX63924.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
SCNpilot_cont_300_bf_scaffold_637_curated_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4831..5616)
DNA (786bp) protein (262aa)
Urease accessory protein UreF n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQS2_SORCE
hypothetical protein
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCNpilot_cont_300_bf_scaffold_637_curated_7
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5609..6097)
DNA (489bp) protein (163aa)
Urease accessory protein UreE n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZWY3_9PROT
Urease accessory protein UreE {ECO:0000256|HAMAP-Rule:MF_00822, ECO:0000256|SAAS:SAAS00072411}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_637_curated_8
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6100..8145)
DNA (2046bp) protein (682aa)
Urease {ECO:0000256|SAAS:SAAS00108778}; EC=3.5.1.5 {ECO:0000256|SAAS:SAAS00108778};; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
ureC; Urease subunit alpha; K01428 urease subunit alpha [EC:3.5.1.5]
Putative urease alpha subunit n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMF6_9PROT
SCNpilot_cont_300_bf_scaffold_637_curated_9
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8157..8459)
DNA (303bp) protein (101aa)
urease subunit gamma (EC:3.5.1.5); K14048 urease subunit gamma/beta [EC:3.5.1.5]
Urease subunit gamma n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GND1_9PROT
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
SCNpilot_cont_300_bf_scaffold_637_curated_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8587..9354)
DNA (768bp) protein (256aa)
Urease accessory protein UreD n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z936_AZOL4
ureD; Urease accessory protein UreD; K03190 urease accessory protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_637_curated_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9469..10020
DNA (552bp) protein (184aa)
Transcription elongation factor GreB n=39 Tax=Bordetella RepID=F4LG74_BORPC
greB; transcription elongation factor
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_637_curated_12
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10152..11390
DNA (1239bp) protein (413aa)
gluconolactonase; K01053 gluconolactonase [EC:3.1.1.17]
gluconolactonase n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003741106
Bradyrhizobium elkanii strain UASWS1015 Contig185, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44708.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCNpilot_cont_300_bf_scaffold_637_curated_13

Not on your lists

comp(11544..12944)
DNA (1401bp) protein (467aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 162 RepID=E3T770_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ADC36164.1}; TaxID=698381 species="Bacteria; environmental samples.;" source="uncultured bacterium 162.;"
ankyrin repeat-containing protein
SCNpilot_cont_300_bf_scaffold_637_curated_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13071..14375)
DNA (1305bp) protein (435aa)
3-carboxy-cis,cis-muconate cycloisomerase; K01857 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
3-carboxy-cis,cis-muconate cycloisomerase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IQ20_9BRAD
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_637_curated_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14380..14943)
DNA (564bp) protein (188aa)
Protocatechuate 3,4-dioxygenase, alpha subunit n=1 Tax=Pseudomonas sp. GM79 RepID=J2WLP1_9PSED
protocatechuate 3,4-dioxygenase subunit alpha
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_637_curated_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14940..15644)
DNA (705bp) protein (235aa)
protocatechuate 3,4-dioxygenase subunit beta; K00449 protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
protocatechuate 3,4-dioxygenase subunit beta n=1 Tax=Pseudomonas mandelii RepID=UPI0003603E4B
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_637_curated_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15677..17221)
DNA (1545bp) protein (515aa)
Sulfatase n=1 Tax=Oceanibaculum indicum P24 RepID=K2IRT8_9PROT
putative sulfatase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_637_curated_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

17294..18325
DNA (1032bp) protein (344aa)
hypothetical protein; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
Blr7063 protein id=4911277 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
SCNpilot_cont_300_bf_scaffold_637_curated_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18322..18519)
DNA (198bp) protein (66aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_637_curated_20
unknown

Not on your lists

comp(18969..19148)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_637_curated_21
unknown

Not on your lists

19319..19621
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_637_curated_22
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19661..20701
DNA (1041bp) protein (347aa)
Hypothethical protein n=1 Tax=Ralstonia solanacearum RepID=D8N2J3_RALSL
hypothetical protein
Hypothethical protein {ECO:0000313|EMBL:CBJ35859.1}; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;"
SCNpilot_cont_300_bf_scaffold_637_curated_23
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20688..21869
DNA (1182bp) protein (394aa)
Radical SAM domain containing protein n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JNY0_STREN
Putative arylsulfatase regulatory protein {ECO:0000313|EMBL:KIG16844.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
radical SAM protein; K06871 uncharacterized protein
SCNpilot_cont_300_bf_scaffold_637_curated_24
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21866..22951
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4QWT3_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK24814.1}; TaxID=1214101 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
SCNpilot_cont_300_bf_scaffold_637_curated_25
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22961..24163
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XLN5_SORCE
Uncharacterized protein {ECO:0000313|EMBL:KFA94087.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_637_curated_26
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24153..25583
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XUE8_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36842.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCNpilot_cont_300_bf_scaffold_637_curated_27
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25580..26557)
DNA (978bp) protein (326aa)
hypothetical protein; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] rbh
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TZU9_9BRAD
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_637_curated_28
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26554..28449)
DNA (1896bp) protein (632aa)
ABC transporter permease n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002F2D454
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43967.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ABC transporter permease rbh
SCNpilot_cont_300_bf_scaffold_637_curated_29
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28461..29480)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DE16_BRAJP
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC46023.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_637_curated_30
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29589..30302
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002DCA94C
Uncharacterized protein {ECO:0000313|EMBL:ERF83353.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
GntR domain-containing protein
Displaying items 1-30 of 37 in total

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