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SCNpilot_cont_300_bf_scaffold_739_curated

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_739_curated_1
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(275..1024)
DNA (750bp) protein (250aa)
Terminase small subunit n=2 Tax=Burkholderia multivorans RepID=B9BQG8_9BURK
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
SCNpilot_cont_300_bf_scaffold_739_curated_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1466..2296
DNA (831bp) protein (277aa)
Methyltransferase FkbM family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LU87_RHITR
methyltransferase FkbM family
Methyltransferase FkbM family {ECO:0000313|EMBL:AGB74802.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_739_curated_3
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2293..3702
DNA (1410bp) protein (470aa)
Glycosyltransferase n=1 Tax=Rhizobium sp. AP16 RepID=J2CW06_9RHIZ
Glycosyl transferase {ECO:0000313|EMBL:KGD99387.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
glycosyltransferase
SCNpilot_cont_300_bf_scaffold_739_curated_4
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4121..5104
DNA (984bp) protein (328aa)
ADP-L-glycero-D-manno-heptose-6-epimerase (EC:5.1.3.20); K03274 ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BRX1_GRABC
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
SCNpilot_cont_300_bf_scaffold_739_curated_5
unknown

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comp(6059..8323)
DNA (2265bp) protein (755aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_739_curated_6
unknown

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comp(8325..9086)
DNA (762bp) protein (254aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_739_curated_7
Gluconobacter oxydans, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9464..10963)
DNA (1500bp) protein (500aa)
bifunctional protein RfaE; K03272 D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
Bifunctional protein HldE n=1 Tax=Gluconobacter oxydans (strain 621H) RepID=HLDE_GLUOX rbh
Bifunctional protein HldE {ECO:0000256|HAMAP-Rule:MF_01603, ECO:0000256|SAAS:SAAS00015122}; TaxID=1288313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter oxydans DSM 3504.;"
SCNpilot_cont_300_bf_scaffold_739_curated_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11929..13014)
DNA (1086bp) protein (362aa)
Integrase catalytic region n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXN1_VARPS
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:ACS18887.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_300_bf_scaffold_739_curated_9
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13387..14181)
DNA (795bp) protein (265aa)
ABC-type polysaccharide/polyol phosphate export system, permease component n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VJ72_9RHIZ
ABC-type polysaccharide/polyol phosphate export system, permease component {ECO:0000313|EMBL:EJN06072.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
capsular polysaccharide export inner-membrane protein; K09688 capsular polysaccharide transport system permease protein
SCNpilot_cont_300_bf_scaffold_739_curated_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14165..15307)
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Anaerococcus sp. PH9 RepID=UPI0002F39C83
capsular polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family
Capsular polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family {ECO:0000313|EMBL:AGB74797.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_739_curated_11
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15421..16653
DNA (1233bp) protein (411aa)
Capsule polysaccharide export protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J2W0P7_9RHIZ
Capsule polysaccharide export protein {ECO:0000313|EMBL:EJN06070.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
capsular polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family
SCNpilot_cont_300_bf_scaffold_739_curated_12
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16672..17349
DNA (678bp) protein (226aa)
ABC transporter related protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I5G7_RHOVT
ABC transporter; K09689 capsular polysaccharide transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:ADP71688.1}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;"
SCNpilot_cont_300_bf_scaffold_739_curated_13
unknown

Not on your lists

17986..18738
DNA (753bp) protein (251aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_739_curated_14
unknown

Not on your lists

comp(19255..19536)
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_739_curated_15
R_WWE3_39_13, WWE3, Bacteria

Not on your lists

comp(19638..20861)
DNA (1224bp) protein (408aa)
Tax=RIFCSPLOWO2_01_FULL_WWE3_39_13_curated
SCNpilot_cont_300_bf_scaffold_739_curated_16
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20977..22194)
DNA (1218bp) protein (406aa)
Putative 3-demethylubiquinone-9 3-O-methyltransferase n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XCR8_METSD
putative 3-demethylubiquinone-9 3-O-methyltransferase
Putative 3-demethylubiquinone-9 3-O-methyltransferase {ECO:0000313|EMBL:ACT50343.1}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
SCNpilot_cont_300_bf_scaffold_739_curated_17
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22504..23373)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXB8_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB74804.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_739_curated_18
Ahrensia sp. R2A130, Ahrensia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23933..24574)
DNA (642bp) protein (214aa)
histidinol-phosphate phosphatase family protein; K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Ahrensia sp. R2A130 RepID=E0MMM1_9RHOB
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000313|EMBL:EFL89545.1}; TaxID=744979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ahrensia.;" source="Ahrensia sp. R2A130.;"
SCNpilot_cont_300_bf_scaffold_739_curated_19
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24699..25991)
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003658ED2
polysaccharide export protein; K01991 polysaccharide export outer membrane protein
Polysaccharide export protein {ECO:0000313|EMBL:ABS69044.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Displaying 19 items

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