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SCNpilot_cont_300_bf_scaffold_2390_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2390_curated_1
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(227..388)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FAD0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV13390.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
SCNpilot_cont_300_bf_scaffold_2390_curated_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

883..1941
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Bacillus sp. L1(2012) RepID=UPI000348041E
luciferase-like protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2390_curated_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1972..2439
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Acidovorax avenae RepID=UPI00031A74C8
regulatory protein MarR
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2390_curated_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2498..3121
DNA (624bp) protein (208aa)
Pyridoxamine 5'-phosphate oxidase-related, FMN binding protein n=1 Tax=gamma proteobacterium HIMB55 RepID=H3NTI5_9GAMM
hypothetical protein; K07006
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2390_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3149..4972
DNA (1824bp) protein (608aa)
hypothetical protein n=1 Tax=Spirulina subsalsa RepID=UPI0002F7D0CB
adenylate/guanylate cyclase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2390_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4948..5622)
DNA (675bp) protein (225aa)
aspartate racemase; K01779 aspartate racemase [EC:5.1.1.13]
Aspartate racemase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TFW5_9BRAD
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2390_curated_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5813..6706)
DNA (894bp) protein (298aa)
Putative permease component of ABC transporter n=1 Tax=alpha proteobacterium BAL199 RepID=A8TP18_9PROT
ABC transporter permease; K02054 putative spermidine/putrescine transport system permease protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2390_curated_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6733..7689)
DNA (957bp) protein (319aa)
Putative permease component of ABC transporter n=1 Tax=alpha proteobacterium BAL199 RepID=A8TP18_9PROT
ABC transporter permease; K02054 putative spermidine/putrescine transport system permease protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2390_curated_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7716..8765)
DNA (1050bp) protein (350aa)
Putative spermidine/putrescine-binding periplasmic abc transporter protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TP19_9PROT
extracellular solute-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2390_curated_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8789..9850)
DNA (1062bp) protein (354aa)
ABC opine/polyamine transporter, ATPase subunit n=1 Tax=alpha proteobacterium BAL199 RepID=A8TP20_9PROT
ABC transporter-like protein; K02052 putative spermidine/putrescine transport system ATP-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2390_curated_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9854..10657)
DNA (804bp) protein (268aa)
ABC polyamine/opine/phosphonate uptake family transporter, inner membrane subunit n=1 Tax=alpha proteobacterium BAL199 RepID=A8TP22_9PROT
binding-protein-dependent transporters inner membrane component; K02053 putative spermidine/putrescine transport system permease protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2390_curated_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10903..12132)
DNA (1230bp) protein (410aa)
Amidohydrolase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TP23_9PROT
amidohydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2390_curated_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12149..13384)
DNA (1236bp) protein (412aa)
Amidohydrolase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TP25_9PROT
amidohydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2390_curated_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13452..14147)
DNA (696bp) protein (232aa)
HAD family hydrolase; K01560 2-haloacid dehalogenase [EC:3.8.1.2]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D84786
2-haloalkanoic acid dehalogenase {ECO:0000313|EMBL:KFC75676.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_300_bf_scaffold_2390_curated_15
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14225..15001)
DNA (777bp) protein (259aa)
AraC-family transcriptional regulator n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I8U5_AZOC5
araC; AraC family transcription regulator
AraC-family transcriptional regulator {ECO:0000313|EMBL:BAF88704.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_300_bf_scaffold_2390_curated_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15108..15629
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Serratia marcescens RepID=UPI0002DF8729
adenylate kinase-like kinase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2390_curated_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15639..16640
DNA (1002bp) protein (334aa)
4-hydroxyproline epimerase (EC:5.1.1.8); K12658 4-hydroxyproline epimerase [EC:5.1.1.8]
Hydroxyproline-2-epimerase n=1 Tax=Oceanibaculum indicum P24 RepID=K2K5C8_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2390_curated_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16765..17967)
DNA (1203bp) protein (401aa)
redicted acyl-CoA transferases/carnitine dehydratase (EC:2.8.3.16)
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U0K9_9RHOB
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2390_curated_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18139..18993
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6BF97_PSERE
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2390_curated_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18960..19646)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UHE0_METS4
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2390_curated_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19649..20449)
DNA (801bp) protein (267aa)
UPF0317 protein C207_02380 n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HHI7_9BRAD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2390_curated_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20459..21214)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3HYZ2_9BRAD
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 22 items

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