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SCNpilot_cont_300_bf_scaffold_1721_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1721_curated_1
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(2..301)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI00036CEEE5
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding {ECO:0000313|EMBL:EFH85813.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
molybdopterin-binding aldehyde oxidase and xanthine dehydrogenase
SCNpilot_cont_300_bf_scaffold_1721_curated_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(298..1110)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI00035FC93D
molybdopterin dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1721_curated_3
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1144..2265)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GVB3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF81492.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1721_curated_4
R_Gammaproteobacteria_35_23, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2280..3587)
DNA (1308bp) protein (436aa)
Carbohydrate-selective porin n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZJU8_TERRK
carbohydrate-selective porin
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_35_23_curated
SCNpilot_cont_300_bf_scaffold_1721_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3804..5531
DNA (1728bp) protein (576aa)
Transcriptional regulator domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH96_9GAMM
adenylate cyclase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1721_curated_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5674..6696
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000378CEE7
Uncharacterized protein {ECO:0000313|EMBL:GAD24694.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
araC family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1721_curated_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6761..6946)
DNA (186bp) protein (62aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1721_curated_8
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7089..8792
DNA (1704bp) protein (568aa)
D-amino acid aminohydrolase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBC4_PHEZH
D-amino acid aminohydrolase
D-amino acid aminohydrolase {ECO:0000313|EMBL:ACG79769.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_1721_curated_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8820..11120)
DNA (2301bp) protein (767aa)
trimethylamine-N-oxide reductase (cytochrome c); K07812 trimethylamine-N-oxide reductase (cytochrome c) 2 [EC:1.7.2.3]
Trimethylamine-N-oxide reductase (Cytochrome c) {ECO:0000313|EMBL:ABD06202.1}; EC=1.7.2.3 {ECO:0000313|EMBL:ABD06202.1};; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034AF310
SCNpilot_cont_300_bf_scaffold_1721_curated_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11138..12190)
DNA (1053bp) protein (351aa)
low specificity L-threonine aldolase; K01620 threonine aldolase [EC:4.1.2.5]
Putative low specificity L-threonine aldolase n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JHM6_SYNJB
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1721_curated_11
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12193..12597)
DNA (405bp) protein (135aa)
Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 21 n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F7D6_9BURK
Glyoxalase {ECO:0000313|EMBL:KGY26612.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 21
SCNpilot_cont_300_bf_scaffold_1721_curated_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12610..12951)
DNA (342bp) protein (114aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1721_curated_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12972..13946
DNA (975bp) protein (325aa)
Pseudouridine synthase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AN44_AZOBR
rluD; pseudouridine synthase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1721_curated_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14091..15023
DNA (933bp) protein (311aa)
RNA polymerase sigma factor RpoH n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ITA4_RHOCS
rpoH; RNA polymerase sigma-32 factor; K03089 RNA polymerase sigma-32 factor
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1721_curated_15
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

Not on your lists

15203..16240
DNA (1038bp) protein (346aa)
aspartate-semialdehyde dehydrogenase; K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
aspartate-semialdehyde dehydrogenase n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B5EC73
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
SCNpilot_cont_300_bf_scaffold_1721_curated_16
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16255..17139)
DNA (885bp) protein (295aa)
Putative epoxide hydrolase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U0T2_9PROT
Putative epoxide hydrolase {ECO:0000313|EMBL:EDP62091.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
alpha/beta hydrolase fold protein
SCNpilot_cont_300_bf_scaffold_1721_curated_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17172..18020
DNA (849bp) protein (283aa)
enoyl-CoA hydratase; K01692 enoyl-CoA hydratase [EC:4.2.1.17]
Enoyl-CoA hydratase n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0UX60_MYCFO
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1721_curated_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18038..19717)
DNA (1680bp) protein (560aa)
mdlC; benzoylformate decarboxylase (EC:4.1.1.7); K01576 benzoylformate decarboxylase [EC:4.1.1.7] rbh
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI0003779E3F
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
SCNpilot_cont_300_bf_scaffold_1721_curated_19
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19815..20690
DNA (876bp) protein (292aa)
UPI0003D04A05 related cluster n=1 Tax=unknown RepID=UPI0003D04A05
Choline kinase {ECO:0000313|EMBL:EXL02355.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1721_curated_20
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20733..22352
DNA (1620bp) protein (540aa)
4-phytase {ECO:0000313|EMBL:ACA18959.1}; EC=3.1.3.26 {ECO:0000313|EMBL:ACA18959.1};; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
4-phytase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI0003755870
4-phytase
SCNpilot_cont_300_bf_scaffold_1721_curated_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22356..22619)
DNA (264bp) protein (88aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1721_curated_22
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22690..27312)
DNA (4623bp) protein (1541aa)
Putative protease n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I456_AZOC5
protease
Putative protease {ECO:0000313|EMBL:BAF87690.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
Displaying 22 items

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