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SCNpilot_cont_300_bf_scaffold_3373_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3373_curated_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(73..1635)
DNA (1563bp) protein (521aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000361E97E
ABC transporter substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3373_curated_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1678..1965
DNA (288bp) protein (96aa)
transcriptional coactivator/pterin dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=PHS_PARL1
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3373_curated_3
R_Pseudomonas_63_210, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2099..2494
DNA (396bp) protein (132aa)
Uncharacterized protein n=4 Tax=Methylobacterium extorquens RepID=B7KNJ5_METC4
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated
SCNpilot_cont_300_bf_scaffold_3373_curated_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2674..3654
DNA (981bp) protein (327aa)
Putative Bug-like extracytoplasmic solute binding receptor, TTT family n=1 Tax=Variovorax paradoxus B4 RepID=T1XCT2_VARPD
putative Bug-like extracytoplasmic solute binding receptor, TTT family
Putative Bug-like extracytoplasmic solute binding receptor, TTT family {ECO:0000313|EMBL:AGU50296.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_3373_curated_5
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3672..4637)
DNA (966bp) protein (322aa)
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00037AF13B
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
SCNpilot_cont_300_bf_scaffold_3373_curated_6
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4634..5005)
DNA (372bp) protein (124aa)
PF14330 domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0N735_9CLOT
PF14330 domain protein {ECO:0000313|EMBL:EJF40302.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3373_curated_7
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(5007..6380)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L0J3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFD25415.1}; TaxID=592015 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum hydrogeniformans ATCC BAA-1850.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3373_curated_8
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6404..7087
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000369AE65
gntR; transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAF88481.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_300_bf_scaffold_3373_curated_9
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7137..7364)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LZM1_HALO1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY18000.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
SCNpilot_cont_300_bf_scaffold_3373_curated_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7481..8431)
DNA (951bp) protein (317aa)
immunogenic protein precursor n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036B01EC
immunogenic protein precursor
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3373_curated_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8439..9410)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002D558D1
cation efflux family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3373_curated_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9414..9656)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YV49_9RHIZ
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3373_curated_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9667..10725)
DNA (1059bp) protein (353aa)
UPI0003D0052F related cluster n=1 Tax=unknown RepID=UPI0003D0052F
chromate transporter; K07240 chromate transporter
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 13 items

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