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SCNpilot_cont_300_bf_scaffold_814_curated

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_814_curated_1
unknown

Not on your lists

3..92
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_814_curated_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


114..428
DNA (315bp) protein (105aa)
30S ribosomal protein S10 n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000369B2AC
rpsJ; 30S ribosomal protein S10
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


461..1162
DNA (702bp) protein (234aa)
50S ribosomal protein L3 n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2M2N4_9PROT
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1191..1811
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=RL4_XANP2
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1808..2131
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036FC24D
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2148..2978
DNA (831bp) protein (277aa)
50S ribosomal protein L2 n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z8Q4_AZOL4
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2989..3267
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=1 Tax=Methyloferula stellata RepID=UPI00035E8314
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3274..3660
DNA (387bp) protein (129aa)
PREDICTED: 50S ribosomal protein L22, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C12D6D
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3660..4379
DNA (720bp) protein (240aa)
30S ribosomal protein S3 n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U4E7_9PROT
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4386..4799
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=RL16_BEII9
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4816..5007
DNA (192bp) protein (64aa)
50S ribosomal protein L29 n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVB3_9RHIZ
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5018..5266
DNA (249bp) protein (83aa)
30S ribosomal protein S17 n=1 Tax=Acetobacter sp. CAG:977 RepID=R5PZA2_9PROT
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5285..5653
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZK3_9PROT
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5657..5980
DNA (324bp) protein (108aa)
50S ribosomal protein L24 n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RLN5_9PROT
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5992..6534
DNA (543bp) protein (181aa)
50S ribosomal protein L5 n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LBT7_9PROT
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6549..6854
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y217_9PROT
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6872..7270
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z8R0_AZOL4
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7273..7806
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z8R1_AZOL4
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7821..8183
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YW11_9PROT
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8200..8790
DNA (591bp) protein (197aa)
30S ribosomal protein S5 n=1 Tax=Acetobacter aceti RepID=UPI0002260993
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8802..8996
DNA (195bp) protein (65aa)
50S ribosomal protein L30 n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=RL30_SPHWW
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9029..9508
DNA (480bp) protein (160aa)
50S ribosomal protein L15 n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DU42_9RHOB
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9568..10914
DNA (1347bp) protein (449aa)
preprotein translocase subunit SecY n=1 Tax=Novispirillum itersonii RepID=UPI000382C524
secY; preprotein translocase subunit SecY
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10911..11561
DNA (651bp) protein (217aa)
adk; adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3]
Adenylate kinase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=KAD_RHOCS rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11683..12060
DNA (378bp) protein (126aa)
30S ribosomal protein S13 n=1 Tax=Asticcacaulis sp. AC402 RepID=V4NKQ6_9CAUL
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_26
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12079..12492
DNA (414bp) protein (138aa)
30S ribosomal protein S11 n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U4G4_9PROT
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11
SCNpilot_cont_300_bf_scaffold_814_curated_27
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12600..13616
DNA (1017bp) protein (339aa)
rpoA; DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
DNA-directed RNA polymerase subunit alpha n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NVT5_AZOS1
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13638..14060
DNA (423bp) protein (141aa)
50S ribosomal protein L17 n=1 Tax=Oceanibaculum indicum P24 RepID=K2JT54_9PROT
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_29
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14118..15377)
DNA (1260bp) protein (420aa)
cytochrome P450; K00517 [EC:1.14.-.-]
Cytochrome P450 n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QHG1_RHOPT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_814_curated_30
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15386..17176)
DNA (1791bp) protein (597aa)
Acyl-CoA dehydrogenase, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IND7_RHOCS
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase, putative {ECO:0000313|EMBL:ACI99034.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Displaying items 1-30 of 47 in total

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