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SCNpilot_cont_300_bf_scaffold_1197_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1197_curated_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1150)
DNA (1149bp) protein (383aa)
acyl-CoA dehydrogenase domain-containing protein; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3]
Acyl-CoA dehydrogenase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YAK8_9GAMM
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1197_curated_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1166..2185)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037E6F13
hypothetical protein; K02051 NitT/TauT family transport system substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1197_curated_3
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2182..2970)
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UB22_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGV18640.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1197_curated_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3231..3527)
DNA (297bp) protein (99aa)
Histone family protein DNA-binding protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQE6_PARL1
histone family DNA-binding protein; K03530 DNA-binding protein HU-beta
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1197_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3713..4609
DNA (897bp) protein (299aa)
hypothetical protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQB7_PARL1
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1197_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4666..6168)
DNA (1503bp) protein (501aa)
betaine-aldehyde dehydrogenase (EC:1.2.1.8); K00130 betaine-aldehyde dehydrogenase [EC:1.2.1.8]
Putative aldehyde dehydrogenase n=1 Tax=Paracoccus methylutens RepID=A7UBP5_9RHOB
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1197_curated_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6246..6704)
DNA (459bp) protein (153aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDF3_PHEZH
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1197_curated_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6784..7632
DNA (849bp) protein (283aa)
Amino-acid ABC transporter, periplasmic binding protein n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q16AY4_ROSDO
amino acid ABC transporter substrate-binding protein; K10001 glutamate/aspartate transport system substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1197_curated_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7658..8683
DNA (1026bp) protein (342aa)
Luciferase-like protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TP38_9PROT
luciferase-like protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1197_curated_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8830..9411)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TS53_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1197_curated_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9423..10391)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037C22FF
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1197_curated_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10451..11380
DNA (930bp) protein (310aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B667FD
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1197_curated_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11389..13494
DNA (2106bp) protein (702aa)
oligopeptidase B (EC:3.4.21.83); K01354 oligopeptidase B [EC:3.4.21.83]
Oligopeptidase B n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GQA8_9BRAD
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1197_curated_14
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13606..16281
DNA (2676bp) protein (892aa)
steroid monooxygenase (EC:1.14.99.-) rbh
Putative flavoprotein involved in K+ transport n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QPQ1_9BRAD
Putative flavoprotein involved in K+ transport {ECO:0000313|EMBL:EIG61757.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
SCNpilot_cont_300_bf_scaffold_1197_curated_15
unknown

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comp(16403..16777)
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1197_curated_16
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16839..17177
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NXZ2_9BRAD
Zinc-type alcohol dehydrogenase-like protein {ECO:0000313|EMBL:CEG10549.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
putative oxidoreductase
Displaying 16 items

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