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SCNpilot_cont_300_bf_scaffold_1264_curated

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1264_curated_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..712
DNA (711bp) protein (237aa)
Aldehyde oxidoreductase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TIR8_9PROT
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1264_curated_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

709..2151
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035CC998
hypothetical protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1264_curated_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2148..3137
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JHX8_9PROT
hypothetical protein; K09740 hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1264_curated_4
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3147..3734
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JK11_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE74777.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1264_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3731..4108
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YA06_9SPHI
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1264_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4232..5437
DNA (1206bp) protein (402aa)
ABC transporter substrate-binding protein n=1 Tax=Acidovorax radicis RepID=UPI0002376E13
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1264_curated_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5584..7461
DNA (1878bp) protein (626aa)
ABC transporter permease n=1 Tax=Curvibacter lanceolatus RepID=UPI00037523DF
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein; K01998 branched-chain amino acid transport system permease protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1264_curated_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7458..8207
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E5095D
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1264_curated_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8204..8920
DNA (717bp) protein (239aa)
ABC transporter related protein n=2 Tax=Burkholderia RepID=E8YU51_9BURK
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
SCNpilot_cont_300_bf_scaffold_1264_curated_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8923..10968
DNA (2046bp) protein (682aa)
N-methylhydantoinase A n=1 Tax=Oceanibaculum indicum P24 RepID=K2JI27_9PROT
N-methylhydantoinase A/acetone carboxylase, beta subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
SCNpilot_cont_300_bf_scaffold_1264_curated_11
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10975..13209)
DNA (2235bp) protein (745aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003802A27
N,N-dimethylformamidase {ECO:0000313|EMBL:KGF69056.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
putative N,N-dimethylformamidase
SCNpilot_cont_300_bf_scaffold_1264_curated_12
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13206..13565)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003815622
hypothetical protein
Blr3548 protein {ECO:0000313|EMBL:BAC48813.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_cont_300_bf_scaffold_1264_curated_13
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13571..14617)
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000360AEEA
ABC transporter substrate-binding protein; K11077 mannopine transport system substrate-binding protein rbh
Putative Spermidine/putrescine-binding protein periplasmic protein {ECO:0000313|EMBL:KGJ69084.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
SCNpilot_cont_300_bf_scaffold_1264_curated_14
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14643..15461)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003652F4B
attB; AttB-like ABC transporter, permease protein AttB
AttB-like ABC transporter, permease protein AttB {ECO:0000313|EMBL:AFL51520.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_cont_300_bf_scaffold_1264_curated_15
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15487..16356)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000363F285
AttA2-like ABC transporter, permease protein {ECO:0000313|EMBL:CCE10565.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
ABC transporter permease; K11079 mannopine transport system permease protein
SCNpilot_cont_300_bf_scaffold_1264_curated_16
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16367..17461)
DNA (1095bp) protein (365aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000376B552
ABC transporter ATP-binding protein; K11080 mannopine transport system ATP-binding protein rbh
SCNpilot_cont_300_bf_scaffold_1264_curated_17
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17661..18800
DNA (1140bp) protein (380aa)
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein {ECO:0000313|EMBL:EFH12686.1}; EC=4.2.1.90 {ECO:0000313|EMBL:EFH12686.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJ39_9PROT
mandelate racemase/muconate lactonizing protein
SCNpilot_cont_300_bf_scaffold_1264_curated_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18927..20066
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036E1826
mandelate racemase/muconate lactonizing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SCNpilot_cont_300_bf_scaffold_1264_curated_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20081..21679)
DNA (1599bp) protein (533aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037F43C9
glucose-methanol-choline oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1264_curated_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21691..22479)
DNA (789bp) protein (263aa)
L-aspartate dehydrogenase; K06989 aspartate dehydrogenase [EC:1.4.1.21]
Probable L-aspartate dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2KL47_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1264_curated_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22476..23756)
DNA (1281bp) protein (427aa)
Putative amidase n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HTK7_PSEUO
amidase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1264_curated_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23821..24507
DNA (687bp) protein (229aa)
Aldolase, putative n=1 Tax=alpha proteobacterium BAL199 RepID=A8TSZ8_9PROT
aldolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1264_curated_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24519..25067
DNA (549bp) protein (183aa)
Glyoxalase/bleomycin resistance protein/dihydroxybiphenyl dioxygenase n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SDW6_9BURK
glyoxalase/bleomycin resistance protein/dihydroxybiphenyl dioxygenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1264_curated_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25060..25668
DNA (609bp) protein (203aa)
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12GV1_POLSJ
pyridoxamine 5'-phosphate oxidase-like protein; K07006
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1264_curated_25
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25823..27301
DNA (1479bp) protein (493aa)
Monooxygenase n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WMQ0_MYCKA
monooxygenase
Monooxygenase {ECO:0000313|EMBL:AGZ50222.1}; TaxID=557599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii ATCC 12478.;"
SCNpilot_cont_300_bf_scaffold_1264_curated_26
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27516..29702
DNA (2187bp) protein (729aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451};; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
catalase/peroxidase; K03782 catalase-peroxidase [EC:1.11.1.21] rbh
Catalase-peroxidase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIJ5_9RHIZ
SCNpilot_cont_300_bf_scaffold_1264_curated_27
Burkholderia rhizoxinica, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29801..30544)
DNA (744bp) protein (248aa)
short chain dehydrogenase (EC:1.-.-.-); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Short chain dehydrogenase (EC 1.-.-.-) {ECO:0000313|EMBL:CBW75707.1}; EC=1.-.-.- {ECO:0000313|EMBL:CBW75707.1};; TaxID=882378 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454).;"
oxidoreductase n=1 Tax=Burkholderia sp. JPY347 RepID=UPI000363FCA6
SCNpilot_cont_300_bf_scaffold_1264_curated_28
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30674..31768
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NVN0_AZOS1
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJV10260.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1264_curated_29
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31774..32466)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3H7F6_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:EQM68272.1}; TaxID=1333854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes OT 69.;"
CRP/FNR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1264_curated_30
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32463..34736)
DNA (2274bp) protein (758aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YCJ8_THIV6
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 30 items

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