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SCNpilot_cont_300_bf_scaffold_1462_curated

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1462_curated_1
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..221)
DNA (219bp) protein (73aa)
Transcriptional regulator n=1 Tax=Burkholderia cenocepacia KC-01 RepID=V4ZBS0_9BURK
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:KEA55558.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
SCNpilot_cont_300_bf_scaffold_1462_curated_2
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

391..963
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Ralstonia solanacearum RepID=UPI0001816E54
Uncharacterized protein {ECO:0000313|EMBL:KFX29301.1}; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1462_curated_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1050..2612
DNA (1563bp) protein (521aa)
Putative GMC-oxidoreductase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TM31_9PROT
putative GMC-oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1462_curated_4
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2637..4937)
DNA (2301bp) protein (767aa)
Xanthine dehydrogenase family protein, large subunit n=1 Tax=alpha proteobacterium BAL199 RepID=A8U1A0_9PROT
Oxidoreductase {ECO:0000313|EMBL:KJC38036.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
molybdopterin binding domain-containing protein
SCNpilot_cont_300_bf_scaffold_1462_curated_5
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4934..5413)
DNA (480bp) protein (160aa)
Xanthine dehydrogenase family protein, small subunit n=1 Tax=alpha proteobacterium BAL199 RepID=A8U1A1_9PROT
Xanthine dehydrogenase family protein, small subunit {ECO:0000313|EMBL:EDP61844.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
xanthine dehydrogenase family protein, small subunit
SCNpilot_cont_300_bf_scaffold_1462_curated_6
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5432..6301)
DNA (870bp) protein (290aa)
Xanthine dehydrogenase family protein, medium subunit n=1 Tax=alpha proteobacterium BAL199 RepID=A8U1A3_9PROT
Xanthine dehydrogenase family protein, medium subunit {ECO:0000313|EMBL:EDP61845.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
xanthine dehydrogenase family protein, medium subunit
SCNpilot_cont_300_bf_scaffold_1462_curated_7
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6474..7196)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CQF9_MYXFH
RNA signlal recognlition particle 4.5S RNA {ECO:0000313|EMBL:ESZ22772.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1462_curated_8
Hyphomonas oceanitis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7261..7716
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037A5627
MarR family transcriptional regulator {ECO:0000313|EMBL:KDA03181.1}; TaxID=1280953 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas oceanitis SCH89.;"
MarR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1462_curated_9
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7741..10245)
DNA (2505bp) protein (835aa)
Peptidase C14 caspase catalytic subunit p20 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IVE4_METNO
peptidase C14 caspase catalytic subunit p20
Peptidase C14 caspase catalytic subunit p20 {ECO:0000313|EMBL:ACL60995.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_300_bf_scaffold_1462_curated_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10433..11437
DNA (1005bp) protein (335aa)
MFS transporter n=1 Tax=Xanthobacteraceae RepID=UPI00037739FE
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1462_curated_11
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11434..13044)
DNA (1611bp) protein (537aa)
Methyltransferase regulatory domain containing protein n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7Q3W9_METSZ
methyltransferase regulatory domain containing protein
Methyltransferase regulatory domain containing protein {ECO:0000313|EMBL:CCJ06424.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_cont_300_bf_scaffold_1462_curated_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13198..14826
DNA (1629bp) protein (543aa)
hypothetical protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Acetolactate synthase, large subunit protein (Thiamine pyrophosphate-dependent enzyme) n=1 Tax=alpha proteobacterium BAL199 RepID=A8TPH6_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1462_curated_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15618..16157)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00037725D5
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1462_curated_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16173..17315
DNA (1143bp) protein (381aa)
Metal activated pyridoxal enzyme n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GXT5_9PROT
D-serine dehydratase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1462_curated_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17340..18107)
DNA (768bp) protein (256aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Y9T2_9RHIZ
short-chain dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1462_curated_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18167..18928
DNA (762bp) protein (254aa)
3-ketoacyl-ACP reductase n=1 Tax=Bradyrhizobium elkanii RepID=UPI000360C04D
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1462_curated_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19090..20124
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00036B25A4
MFS transporter
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1462_curated_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20121..20780
DNA (660bp) protein (220aa)
Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis n=1 Tax=alpha proteobacterium BAL199 RepID=A8TKY4_9PROT
putative DSBA oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1462_curated_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20831..21508
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003172981
TetR family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1462_curated_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21396..24893)
DNA (3498bp) protein (1166aa)
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
Transcription-repair-coupling factor n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZTZ3_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1462_curated_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24893..25159)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NTY0_AZOS1
hypothetical protein; K09159 hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1462_curated_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25248..27329
DNA (2082bp) protein (694aa)
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
RecG-like helicase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W4F4_MAGSA
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1462_curated_23
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27330..29354)
DNA (2025bp) protein (675aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AZM7_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:KGM31037.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
conserved protein of unknown function; putative ATPase involved in DNA repair domain
SCNpilot_cont_300_bf_scaffold_1462_curated_24
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29574..29981)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TRY7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP64424.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
NifU-like protein
SCNpilot_cont_300_bf_scaffold_1462_curated_25
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29978..31198)
DNA (1221bp) protein (407aa)
cysteine desulfurase n=1 Tax=Acetobacter aceti RepID=UPI000225FD71
selenocysteine lyase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
SCNpilot_cont_300_bf_scaffold_1462_curated_26
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31195..32847)
DNA (1653bp) protein (551aa)
molybdopterin binding protein; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
Molybdopterin binding protein, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISQ4_RHOCS
4-diphosphocytidyl-2C-methyl-D-erythritol kinase {ECO:0000313|EMBL:KJB92786.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
SCNpilot_cont_300_bf_scaffold_1462_curated_27
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32844..33572)
DNA (729bp) protein (243aa)
Putative xanthine and CO dehydrogenases maturation factor, XdhC/CoxI family protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JYY0_9PROT
Xanthine dehydrogenase {ECO:0000313|EMBL:EWY36204.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
putative xanthine and CO dehydrogenases maturation factor, XdhC/CoxI family protein
SCNpilot_cont_300_bf_scaffold_1462_curated_28
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33576..33896)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JJM0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE75533.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
putative xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
SCNpilot_cont_300_bf_scaffold_1462_curated_29
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33914..34153)
DNA (240bp) protein (80aa)
VWA containing CoxE-like protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SQI5_NITWN
von Willebrand factor A; K07161
VWA containing CoxE-like protein {ECO:0000313|EMBL:ABA05456.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
Displaying 29 items

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