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SCNpilot_cont_300_bf_scaffold_476_curated

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_476_curated_1
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1832
DNA (1830bp) protein (610aa)
Putative methylase/helicase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMS0_TISMK
putative methylase/helicase
Putative methylase/helicase {ECO:0000313|EMBL:AFK54058.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_300_bf_scaffold_476_curated_2
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1843..2883
DNA (1041bp) protein (347aa)
Putative uncharacterized protein n=1 Tax=Acidiphilium sp. PM RepID=F7SAF4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EGO93774.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_476_curated_3
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3151..4119
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F09D6A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFI53009.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_cont_300_bf_scaffold_476_curated_4
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4309..4935
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000372CFAE
DNA repair protein RadC {ECO:0000313|EMBL:EFH12613.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
DNA repair protein RadC; K03630 DNA repair protein RadC
SCNpilot_cont_300_bf_scaffold_476_curated_5
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5084..5560
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B4P5_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK57197.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_300_bf_scaffold_476_curated_6
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6097..6420
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4Y2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI53012.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_476_curated_7
unknown

Not on your lists

6725..6967
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_476_curated_8
unknown

Not on your lists

6967..7542
DNA (576bp) protein (192aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_476_curated_9
unknown

Not on your lists

7503..7898
DNA (396bp) protein (132aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_476_curated_10
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8250..9248
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI00039FD8DE
Uncharacterized protein {ECO:0000313|EMBL:AJY47628.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
SCNpilot_cont_300_bf_scaffold_476_curated_11
unknown

Not on your lists

comp(9261..9866)
DNA (606bp) protein (202aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_476_curated_12
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10512..10994
DNA (483bp) protein (161aa)
Atc1 protein n=3 Tax=Bradyrhizobium RepID=G7DBJ6_BRAJP
Atc1 protein
Atc1 protein {ECO:0000313|EMBL:BAC45327.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_cont_300_bf_scaffold_476_curated_13
unknown

Not on your lists

11402..11563
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_476_curated_14
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11910..12428
DNA (519bp) protein (173aa)
Uncharacterized protein n=3 Tax=Sphingobium RepID=D4YY17_SPHJU
Uncharacterized protein {ECO:0000313|EMBL:CDX12096.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_476_curated_15
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12524..12757)
DNA (234bp) protein (78aa)
Putative transcriptional regulator, XRE family n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EC10_BRASB
XRE family transcriptional regulator {ECO:0000313|EMBL:KGT74571.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
XRE family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_476_curated_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13006..13269
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PAN7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38616.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_476_curated_17
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13667..14185
DNA (519bp) protein (173aa)
UPI0003D03E74 related cluster n=1 Tax=unknown RepID=UPI0003D03E74
Uncharacterized protein {ECO:0000313|EMBL:ESZ86671.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_476_curated_18
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14330..14665
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDB9_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS66012.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_300_bf_scaffold_476_curated_19
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14823..15302
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SAG8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAJ29631.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_476_curated_20
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15299..15814
DNA (516bp) protein (172aa)
Type IV secretory pathway protease TraF n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z2K8_SPHJU
Conjugal transfer protein TraF {ECO:0000313|EMBL:GAJ30142.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
traF; type IV secretory pathway protease TraF
SCNpilot_cont_300_bf_scaffold_476_curated_21
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15817..16722
DNA (906bp) protein (302aa)
Lytic transglycosylase catalytic n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SV59_CAUSK
lytic transglycosylase catalytic subunit
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ABZ72949.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_476_curated_22
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16967..18706
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJC1_XANP2
Type VI secretion protein {ECO:0000313|EMBL:KKC25990.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_476_curated_23
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18861..20522
DNA (1662bp) protein (554aa)
hypothetical protein id=1812557 bin=GWA2_OP3_53_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
Uncharacterized protein {ECO:0000313|EMBL:ETW97219.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
SCNpilot_cont_300_bf_scaffold_476_curated_24
Magnetococcus marinus, Magnetococcus, Magnetococcales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20582..21661
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L5T0_MAGSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK43323.1}; TaxID=156889 species="Bacteria; Proteobacteria; Alphaproteobacteria; Magnetococcales; Magnetococcaceae; Magnetococcus.;" source="Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1).;"
SCNpilot_cont_300_bf_scaffold_476_curated_25
unknown

Not on your lists

comp(21905..22345)
DNA (441bp) protein (147aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_476_curated_26
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23300..24334
DNA (1035bp) protein (345aa)
UPI0003CE99C6 related cluster n=1 Tax=unknown RepID=UPI0003CE99C6
Uncharacterized protein {ECO:0000313|EMBL:ESY90504.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_476_curated_27
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24331..27633
DNA (3303bp) protein (1101aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
UPI0003CE6EB4 related cluster n=1 Tax=unknown RepID=UPI0003CE6EB4
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_476_curated_28
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27956..29941
DNA (1986bp) protein (662aa)
TRAG family protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDB0_XANP2
TRAG family protein {ECO:0000313|EMBL:ABS66003.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4
SCNpilot_cont_300_bf_scaffold_476_curated_29
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29953..30405
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJC3_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS66002.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_300_bf_scaffold_476_curated_30
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30633..31568
DNA (936bp) protein (312aa)
P-type conjugative transfer ATPase TrbB n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJC4_XANP2
P-type conjugative transfer ATPase TrbB; K03196 type IV secretion system protein VirB11
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:ABS68117.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Displaying items 1-30 of 50 in total

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