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SCNpilot_cont_300_bf_scaffold_2635_curated

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2635_curated_1
bacterium YEK0313, Bacteria

Not on your lists

1..846
DNA (846bp) protein (282aa)
Sulfate adenylyltransferase {ECO:0000256|SAAS:SAAS00055732}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055732};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4); K00957 sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
Sulfate adenylyltransferase subunit 2 n=1 Tax=Rhodovulum sp. PH10 RepID=J6UD27_9RHOB
SCNpilot_cont_300_bf_scaffold_2635_curated_2
bacterium YEK0313, Bacteria

Not on your lists

846..2741
DNA (1896bp) protein (632aa)
bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase; K00955 bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000312CBB7
Bifunctional enzyme CysN/CysC {ECO:0000313|EMBL:CEJ16090.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_300_bf_scaffold_2635_curated_3
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2834..4105
DNA (1272bp) protein (424aa)
Acyl-CoA dehydrogenase n=1 Tax=Williamsia sp. D3 RepID=V8D2V3_9ACTO
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KEI45590.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
fadE12_3
SCNpilot_cont_300_bf_scaffold_2635_curated_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4229..5134
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMG1_TISMK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2635_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5162..5848
DNA (687bp) protein (229aa)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JV32_9PROT
hisB; imidazoleglycerol-phosphate dehydratase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2635_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5861..6514
DNA (654bp) protein (218aa)
hisH; amidotransferase; K02501 glutamine amidotransferase [EC:2.4.2.-]
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NYP0_AZOS1
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2635_curated_7
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6579..7022
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Arthrobacter sp. TB 23 RepID=UPI000367A377
Uncharacterized protein {ECO:0000313|EMBL:AIB14055.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2635_curated_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7054..7656)
DNA (603bp) protein (201aa)
leuD; alpha-IPM isomerase; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase small subunit id=2642972 bin=GWF2_Methylomirabilis_70_14 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
SCNpilot_cont_300_bf_scaffold_2635_curated_9
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7666..9069)
DNA (1404bp) protein (468aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
3-isopropylmalate dehydratase, large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase large subunit id=2937753 bin=GWC2_Methylomirabilis_70_16 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
SCNpilot_cont_300_bf_scaffold_2635_curated_10
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9082..9951)
DNA (870bp) protein (290aa)
Candidate carboxyvinyl-carboxyphosphonate phosphorylmutase (Carboxyphosphonoenolpyruvate phosphonomutase) n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZ93_RAMTT
PrpB protein {ECO:0000313|EMBL:BAQ50063.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
carboxyvinyl-carboxyphosphonate phosphorylmutase
SCNpilot_cont_300_bf_scaffold_2635_curated_11
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9963..10757)
DNA (795bp) protein (265aa)
Putative Transcriptional regulator, GntR family protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SNE4_9BRAD
Putative Transcriptional regulator, GntR family protein {ECO:0000313|EMBL:CCD95721.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2635_curated_12
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10754..11521)
DNA (768bp) protein (256aa)
ABC transporter n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AXP7_AZOBR
Nitrate ABC transporter permease {ECO:0000313|EMBL:AIB15861.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
ABC transporter
SCNpilot_cont_300_bf_scaffold_2635_curated_13
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11532..12305)
DNA (774bp) protein (258aa)
ABC transporter n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AXP8_AZOBR
ABC transporter
Nitrate ABC transporter permease {ECO:0000313|EMBL:AIB15862.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
SCNpilot_cont_300_bf_scaffold_2635_curated_14
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12302..13153)
DNA (852bp) protein (284aa)
ABC transporter n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IA69_AZOC5
ABC transporter
ABC transporter {ECO:0000313|EMBL:BAF88469.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_300_bf_scaffold_2635_curated_15
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(13150..14142)
DNA (993bp) protein (331aa)
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2J0U4_9PROT
bacterial periplasmic substrate-binding protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
SCNpilot_cont_300_bf_scaffold_2635_curated_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14252..15247)
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00037F5DAA
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2635_curated_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15240..15575)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1K9_9RHIZ
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2635_curated_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15578..16459)
DNA (882bp) protein (294aa)
Cyclic imide hydrolase n=1 Tax=Pseudomonas putida RepID=Q4JG22_PSEPU
polysaccharide deacetylase family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2635_curated_19
unknown

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16572..17291
DNA (720bp) protein (240aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2635_curated_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17260..18636)
DNA (1377bp) protein (459aa)
Paraquat-inducible protein A n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVR5_GRABC
paraquat-inducible protein A; K03808 paraquat-inducible protein A
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2635_curated_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18714..19304)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F6A6C7
hypothetical protein; K09857 hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2635_curated_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19304..21028)
DNA (1725bp) protein (575aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00037022BD
paraquat-inducible protein B; K06192 paraquat-inducible protein B
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2635_curated_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21067..24030)
DNA (2964bp) protein (988aa)
FtsK/SpoIIIE family, putative n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B6Z3_9RHOB
ftsK; DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2635_curated_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24046..25251)
DNA (1206bp) protein (402aa)
dapC; N-succinyldiaminopimelate aminotransferase (EC:2.6.1.17)
N-succinyldiaminopimelate aminotransferase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P5H0_AZOS1
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2635_curated_25
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25500..26138)
DNA (639bp) protein (213aa)
amidase n=1 Tax=Dyella japonica RepID=UPI0002F67152
Amidase {ECO:0000313|EMBL:AIF48286.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
isochorismatase hydrolase
SCNpilot_cont_300_bf_scaffold_2635_curated_26
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26135..27025)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P2X1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35084.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein; K06911
SCNpilot_cont_300_bf_scaffold_2635_curated_27
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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27142..28041
DNA (900bp) protein (300aa)
LysR family transcriptional regulator n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00035EC445
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KGB53965.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
LysR family transcriptional regulator
Displaying 27 items

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