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SCNpilot_cont_300_bf_scaffold_2525_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2525_curated_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..718
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC460 RepID=V4PHX6_9CAUL
putative two-component response regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2525_curated_2
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

775..1158
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Frankia sp. QA3 RepID=I9KAP0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EIV90988.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
Ferritin/ribonucleotide reductase-like; K09700 hypothetical protein
SCNpilot_cont_300_bf_scaffold_2525_curated_3
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1163..2002
DNA (840bp) protein (280aa)
Linocin_M18 bacteriocin protein n=2 Tax=Rhodospirillum rubrum RepID=G2TDK6_RHORU
Linocin_M18 bacteriocin protein
Linocin_M18 bacteriocin protein {ECO:0000313|EMBL:ABC21775.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
SCNpilot_cont_300_bf_scaffold_2525_curated_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2056..2703
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZV4_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2525_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2866..3270
DNA (405bp) protein (135aa)
Globin n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CP50_9RHIZ
hemoprotein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2525_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3287..4330)
DNA (1044bp) protein (348aa)
holA; DNA polymerase III subunit delta (EC:2.7.7.7); K02340 DNA polymerase III subunit delta [EC:2.7.7.7]
DNA polymerase III delta subunit n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HPK5_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2525_curated_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4338..6242)
DNA (1905bp) protein (635aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002EF46B1
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_cont_300_bf_scaffold_2525_curated_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6271..8862)
DNA (2592bp) protein (864aa)
Leucine--tRNA ligase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JSQ1_9PROT
leuS; leucine tRNA synthetase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2525_curated_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8976..9632)
DNA (657bp) protein (219aa)
Uncharacterized protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=V6F597_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2525_curated_10
unknown

Not on your lists

comp(9721..9816)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2525_curated_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9965..11347
DNA (1383bp) protein (461aa)
Outer membrane protein (Porin) n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TR75_TISMK
porin
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2525_curated_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11449..11886)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TIM5_9PROT
type 11 methyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 12 items

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