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SCNpilot_cont_300_bf_scaffold_1691_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1691_curated_1
unknown

Not on your lists

1..132
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1691_curated_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161..718)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YFY6_9GAMM
carboxymuconolactone decarboxylase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1691_curated_3
unknown

Not on your lists

comp(800..1006)
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1691_curated_4
unknown

Not on your lists

1222..1794
DNA (573bp) protein (191aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1691_curated_5
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1893..2714
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002D8C523
aldo/keto reductase
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
SCNpilot_cont_300_bf_scaffold_1691_curated_6
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2871..3770)
DNA (900bp) protein (300aa)
Male sterility protein-like protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U6R5_MYXSD
Epimerase {ECO:0000313|EMBL:KGM35833.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
male sterility protein-like protein
SCNpilot_cont_300_bf_scaffold_1691_curated_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3767..4000)
DNA (234bp) protein (78aa)
putative NAD-dependent formate dehydrogenase; K00126 formate dehydrogenase, delta subunit [EC:1.2.1.2]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036141E0
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1691_curated_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4006..6849)
DNA (2844bp) protein (948aa)
fdsA; formate dehydrogenase subunit alpha (EC:1.2.1.2); K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2]
Formate dehydrogenase, alpha subunit n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TUZ6_9BRAD
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1691_curated_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6860..8404)
DNA (1545bp) protein (515aa)
Putative formate dehydrogenase beta subunit n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TUZ7_9BRAD
nuoF; NADH dehydrogenase I subunit F; K00124 formate dehydrogenase, beta subunit
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1691_curated_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8401..8883)
DNA (483bp) protein (161aa)
NADH dehydrogenase (Ubiquinone), 24 kDa subunit n=1 Tax=Acidiphilium sp. PM RepID=F7S5U5_9PROT
putative formate dehydrogenase gamma subunit; K00127 formate dehydrogenase, gamma subunit
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1691_curated_11
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9032..9961)
DNA (930bp) protein (310aa)
Transcriptional regulator n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HQZ6_AZOC5
lysR; transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAF87077.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_300_bf_scaffold_1691_curated_12
Alcanivorax sp. PN-3, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10051..11211
DNA (1161bp) protein (387aa)
isovaleryl-CoA dehydrogenase (EC:1.3.99.10); K06446 acyl-CoA dehydrogenase [EC:1.3.99.-]
acyl-CoA dehydrogenase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000366A20F
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ERS10650.1}; TaxID=1397526 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. PN-3.;"
SCNpilot_cont_300_bf_scaffold_1691_curated_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11208..12386
DNA (1179bp) protein (393aa)
acyl-CoA dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI000365B496
putative acyl-CoA dehydrogenase
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:AGU53535.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_1691_curated_14
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12495..13640
DNA (1146bp) protein (382aa)
FAD dependent oxidoreductase n=1 Tax=Caulobacter sp. AP07 RepID=J2P2R4_9CAUL
FAD dependent oxidoreductase {ECO:0000313|EMBL:EJL21257.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
FAD dependent oxidoreductase
SCNpilot_cont_300_bf_scaffold_1691_curated_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13688..14767)
DNA (1080bp) protein (360aa)
DNA polymerase IV n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S4W2_9SPHN
DNA-directed DNA polymerase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1691_curated_16
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14848..15450
DNA (603bp) protein (201aa)
Nitroreductase family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZYH9_9PROT
Nitroreductase family protein {ECO:0000313|EMBL:EHM01878.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
nitroreductase family protein
SCNpilot_cont_300_bf_scaffold_1691_curated_17
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15476..16453)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CE83_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL69884.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1691_curated_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16515..17828)
DNA (1314bp) protein (438aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase; K01740 O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
O-acetylhomoserine/O-acetylserine sulfhydrylase {ECO:0000313|EMBL:ABD06070.1}; EC=2.5.1.49 {ECO:0000313|EMBL:ABD06070.1};; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
O-acetylhomoserine aminocarboxypropyltransferase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034D601B
Displaying 18 items

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