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SCNpilot_cont_300_bf_scaffold_969_curated

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_969_curated_1
Thalassospira permensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1949)
DNA (1947bp) protein (649aa)
autotransporter, partial n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225A8CF
Uncharacterized protein {ECO:0000313|EMBL:KEO52528.1}; TaxID=1353532 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira permensis NBRC 106175.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_969_curated_2
unknown

Not on your lists

comp(2301..2537)
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_969_curated_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3277..3789)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Xanthobacteraceae bacterium 501b RepID=UPI0003643234
nitrilotriacetate monooxygenase component B protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_969_curated_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3987..4847
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AIP8_AZOBR
conserved protein of unknown function; putative Adenylate cyclase domain
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_969_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4902..6068
DNA (1167bp) protein (389aa)
Putative GTPase n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9S6G4_PHAFV
cobW; cobalamin synthesis protein CobW
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_969_curated_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6105..6854
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EC15B4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE60909.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_969_curated_7
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6831..9977)
DNA (3147bp) protein (1049aa)
Putative component of multidrug efflux pump, acrB/acrD/acrF family n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SHK2_9BRAD
Putative component of multidrug efflux pump, AcrB/AcrD/AcrF family {ECO:0000313|EMBL:BAM87231.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
putative component of multidrug efflux pump, AcrB/AcrD/AcrF family
SCNpilot_cont_300_bf_scaffold_969_curated_8
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9995..11197)
DNA (1203bp) protein (401aa)
RND transporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036263DA
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ERF84217.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
secretion protein HlyD; K03585 membrane fusion protein
SCNpilot_cont_300_bf_scaffold_969_curated_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11478..12023)
DNA (546bp) protein (182aa)
Predicted membrane protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FVD2_PHAMO
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_969_curated_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12519..13505
DNA (987bp) protein (329aa)
ABC transporter substrate-binding protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000369321A
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_cont_300_bf_scaffold_969_curated_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13492..14397)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U154_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_969_curated_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14492..17386
DNA (2895bp) protein (965aa)
DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7]
DNA polymerase I n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MAT5_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_969_curated_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17418..18035
DNA (618bp) protein (206aa)
putative glutathione S-transferase (EC:2.5.1.18)
Putative glutathione S-transferase-like protein n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MNZ3_PSEPS
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_969_curated_14
bacterium YEK0313, Bacteria

Not on your lists

18155..18547
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3Q777_RHOPT
Helix-hairpin-helix motif protein {ECO:0000313|EMBL:CEJ10670.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_969_curated_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18633..18965)
DNA (333bp) protein (111aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_969_curated_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18981..19196)
DNA (216bp) protein (72aa)
hypothetical protein id=14430353 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_969_curated_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19223..20140)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46SE9_CUPPJ
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_969_curated_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20137..21309)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Burkholderia phenoliruptrix BR3459a RepID=K0E0L9_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_969_curated_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21416..23206)
DNA (1791bp) protein (597aa)
Putative adenylate/guanylate cyclase n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AIV6_RHIFH
putative adenylate/guanylate cyclase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_969_curated_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23356..24963)
DNA (1608bp) protein (536aa)
pckA; phosphoenolpyruvate carboxykinase (EC:4.1.1.49); K01610 phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H4C5_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_969_curated_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25233..25952)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JCB6_9PROT
hypothetical protein; K07226 hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_969_curated_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26083..26778
DNA (696bp) protein (232aa)
Response regulator n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2YFG5_9PROT
response regulator; K14981 two-component system, OmpR family, response regulator ChvI
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_969_curated_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26747..28585
DNA (1839bp) protein (613aa)
Signal transduction histidine kinase; K14980 two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
Signal transduction histidine kinase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J0C4_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_969_curated_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28582..29028
DNA (447bp) protein (149aa)
hprK; HPr kinase (EC:2.7.1.-)
Putative HPr kinase/phosphorylase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F0L0_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_969_curated_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29025..29981
DNA (957bp) protein (319aa)
UPF0042 nucleotide-binding protein K678_12374 n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TRJ8_PHAFV
hypothetical protein; K06958 UPF0042 nucleotide-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_969_curated_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29998..30402
DNA (405bp) protein (135aa)
PTS system fructose, IIA component; K02793 PTS system, mannose-specific IIA component [EC:2.7.1.69]
Phosphotransferase system, mannose/fructose-specific component IIA n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TFX7_PHAFV
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_969_curated_27
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30399..30707
DNA (309bp) protein (103aa)
HPr kinase n=1 Tax=Afipia birgiae RepID=UPI000313E0E4
phosphotransferase system, HPr-related protein; K11189 phosphocarrier protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_969_curated_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30910..32301
DNA (1392bp) protein (464aa)
S-adenosyl-L-homocysteine hydrolase; K01251 adenosylhomocysteinase [EC:3.3.1.1]
Adenosylhomocysteinase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ILJ5_AZOC5
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_969_curated_29
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32359..32802
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00035FFFD1
hypothetical protein; K06925 UPF0079 ATP-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_969_curated_30
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32762..33793
DNA (1032bp) protein (344aa)
Aminoglycoside phosphotransferase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6E7_9PROT
phosphotransferase related to Ser/Thr protein kinase; K07102
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 59 in total

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