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SCNpilot_cont_300_bf_scaffold_30806_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_30806_curated_1
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..864
DNA (864bp) protein (288aa)
Putative peptide ABC transport protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GCC2_9BRAD
putative peptide ABC transport protein; K02032 peptide/nickel transport system ATP-binding protein
Putative peptide ABC transport protein {ECO:0000313|EMBL:BAL78409.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCNpilot_cont_300_bf_scaffold_30806_curated_2
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(867..1604)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NYR7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35482.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_30806_curated_3
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1601..2170)
DNA (570bp) protein (190aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P1Z6_9BRAD
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKS35481.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
sigma-70 region 2; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_300_bf_scaffold_30806_curated_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2413..3189
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13CI1_RHOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE38208.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_300_bf_scaffold_30806_curated_5
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3447..3812)
DNA (366bp) protein (122aa)
Addiction module antidote protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S2B0_9RHOB
Addiction module antidote protein {ECO:0000313|EMBL:EEW24781.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;"
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_30806_curated_6
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3839..4129)
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXW4_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK54440.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_30806_curated_7
Aeromonas veronii, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4433..5164)
DNA (732bp) protein (244aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=I2P4W7_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EKB19345.1}; TaxID=1073385 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas veronii AMC35.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_30806_curated_8
unknown

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comp(5177..5368)
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_30806_curated_9

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comp(5440..6033)
DNA (594bp) protein (198aa)
Integrase family protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M1F6_METRJ
Uncharacterized protein {ECO:0000313|EMBL:KKM79044.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
integrase family protein
Displaying 9 items

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