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SCNpilot_cont_300_bf_scaffold_1476_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1476_curated_1
Burkholderia lata, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..648
DNA (648bp) protein (216aa)
Transcriptional regulator, TetR family n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39N09_BURS3
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABB06157.1}; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194; / 383).;"
SCNpilot_cont_300_bf_scaffold_1476_curated_2
Pandoraea vervacti, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(590..1387)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VTD1_STEMA
AraC family transcriptional regulator {ECO:0000313|EMBL:AJP57288.1}; TaxID=656178 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea vervacti.;"
AraC family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1476_curated_3
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1471..2670
DNA (1200bp) protein (400aa)
Transporter, major facilitator family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZZD3_9PROT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EHM01657.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
cyanate transport protein
SCNpilot_cont_300_bf_scaffold_1476_curated_4
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2678..3295)
DNA (618bp) protein (206aa)
DSBA oxidoreductase n=1 Tax=Acidiphilium sp. PM RepID=F7S680_9PROT
DSBA oxidoreductase {ECO:0000313|EMBL:KDM66043.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
DSBA oxidoreductase
SCNpilot_cont_300_bf_scaffold_1476_curated_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3297..4262)
DNA (966bp) protein (322aa)
Putative Bug-like extracytoplasmic solute binding receptor, TTT family n=1 Tax=Variovorax paradoxus B4 RepID=T1XH88_VARPD
putative Bug-like extracytoplasmic solute binding receptor, TTT family
Putative Bug-like extracytoplasmic solute binding receptor, TTT family {ECO:0000313|EMBL:AGU51881.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_1476_curated_6
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4297..5100)
DNA (804bp) protein (268aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00036154D4
Uncharacterized protein {ECO:0000313|EMBL:KJC55982.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
SCNpilot_cont_300_bf_scaffold_1476_curated_7
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5203..5856)
DNA (654bp) protein (218aa)
Bll7793 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89CK4_BRADU
PEP2 protein rbh
Bll7793 protein {ECO:0000313|EMBL:BAC53058.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_cont_300_bf_scaffold_1476_curated_8
bacterium YEK0313, Bacteria

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5889..6647
DNA (759bp) protein (253aa)
Transcriptional regulator, IclR family n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J2J0_POLGS
HTH-type transcriptional regulator KipR {ECO:0000313|EMBL:CEJ14858.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
IclR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1476_curated_9
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6693..7019)
DNA (327bp) protein (109aa)
Response regulator receiver protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZYQ9_STAND
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ADH91028.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_300_bf_scaffold_1476_curated_10
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7179..7802)
DNA (624bp) protein (208aa)
Transcriptional regulatory protein fixJ n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JHC9_HYPSM
fixJ; transcriptional regulator fixJ
Transcriptional regulatory protein fixJ {ECO:0000313|EMBL:CCB64383.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_cont_300_bf_scaffold_1476_curated_11
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7799..9337)
DNA (1539bp) protein (513aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002F88AB9
multi-sensor signal transduction histidine kinase
SCNpilot_cont_300_bf_scaffold_1476_curated_12
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9478..12561)
DNA (3084bp) protein (1028aa)
Multidrug efflux system, subunit B n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TWH9_9BRAD
Multidrug efflux system, subunit B {ECO:0000313|EMBL:CCE10817.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
AcrB/AcrD/AcrF family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family rbh
SCNpilot_cont_300_bf_scaffold_1476_curated_13
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12558..13529)
DNA (972bp) protein (324aa)
Multidrug efflux system, subunit A n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TWH8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJZ30023.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
hypothetical protein; K07799 putative multidrug efflux transporter MdtA
Displaying 13 items

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