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SCNpilot_cont_300_bf_scaffold_1367_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1367_curated_1
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..285
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NTS3_AFIFE
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EZP49023.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
DNA-binding response regulator
SCNpilot_cont_300_bf_scaffold_1367_curated_2
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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349..1578
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00036A5043
HlyD family heavy metal efflux pump; K15727 cobalt-zinc-cadmium resistance protein CzcB
Putative heavy metal efflux pump, HlyD family {ECO:0000313|EMBL:ABQ33761.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_300_bf_scaffold_1367_curated_3
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1597..4839
DNA (3243bp) protein (1081aa)
cytochrome C peroxidase n=1 Tax=Methylosinus sp. LW4 RepID=UPI00035DCCA5
CzcA family heavy metal efflux pump {ECO:0000313|EMBL:ERF84652.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
cation efflux system protein heavy metal efflux pump CzcA-like; K15726 cobalt-zinc-cadmium resistance protein CzcA
SCNpilot_cont_300_bf_scaffold_1367_curated_4
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4836..6503
DNA (1668bp) protein (556aa)
RND efflux system, outer membrane lipoprotein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0ABC3_COLFT
Uncharacterized protein {ECO:0000313|EMBL:KGM34064.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
nodT; RND efflux system, outer membrane lipoprotein
SCNpilot_cont_300_bf_scaffold_1367_curated_5
unknown

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6547..7368
DNA (822bp) protein (274aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1367_curated_6
unknown

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7371..7706
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1367_curated_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7715..8695)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037D28DC
bug; ABC transporter substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1367_curated_8
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8756..10441
DNA (1686bp) protein (562aa)
N-acyl-D-aspartate/D-glutamate deacylase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WPJ7_9BURK
amidohydrolase 3
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_cont_300_bf_scaffold_1367_curated_9
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10502..10978
DNA (477bp) protein (159aa)
Bll1134 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89VB3_BRADU
hypothetical protein
Bll1134 protein {ECO:0000313|EMBL:BAC46399.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_cont_300_bf_scaffold_1367_curated_10
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11000..12088)
DNA (1089bp) protein (363aa)
Putative beta-lactamase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TYV4_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:AKC68711.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
beta-lactamase
SCNpilot_cont_300_bf_scaffold_1367_curated_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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12164..12424
DNA (261bp) protein (87aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1367_curated_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12421..13488)
DNA (1068bp) protein (356aa)
Amino acid ABC transporter permease n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KZT4_9GAMM
Inner membrane amino-acid ABC transporter permease protein {ECO:0000313|EMBL:KFC70795.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter permease; K09971 general L-amino acid transport system permease protein
SCNpilot_cont_300_bf_scaffold_1367_curated_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13485..13643)
DNA (159bp) protein (53aa)
amino acid ABC transporter permease n=1 Tax=Leucothrix mucor RepID=UPI0003B46A24
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:KFC70796.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
amino acid ABC transporter permease; K09970 general L-amino acid transport system permease protein
Displaying 13 items

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