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SCNpilot_cont_300_bf_scaffold_911_curated

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_911_curated_1
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..2305)
DNA (2304bp) protein (768aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMG5_XANP2
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ABS69208.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
CzcA family heavy metal efflux protein; K15726 cobalt-zinc-cadmium resistance protein CzcA
SCNpilot_cont_300_bf_scaffold_911_curated_2
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2330..3322)
DNA (993bp) protein (331aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ICX7_XANP2
RND family efflux transporter MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABS65870.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_300_bf_scaffold_911_curated_3
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3319..4608)
DNA (1290bp) protein (430aa)
Outer membrane efflux protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK93_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig141, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53518.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
czcC1; outer membrane efflux protein, putative cobalt-zinc-cadmium resistance protein CzcC; K15725 cobalt-zinc-cadmium resistance protein CzcC
SCNpilot_cont_300_bf_scaffold_911_curated_4
unknown

Not on your lists

comp(4675..5067)
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_911_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5175..6047)
DNA (873bp) protein (291aa)
Galactose mutarotase-like enzyme n=1 Tax=Microvirga sp. WSM3557 RepID=I4YLW0_9RHIZ
aldose 1-epimerase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_911_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6133..7161)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI00036CD985
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_911_curated_7
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7195..8898)
DNA (1704bp) protein (568aa)
Putative sulfate transporter with a STAS domain (C-terminal) n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RPM8_9BRAD
Putative sulfate transporter with a STAS domain (C-terminal) {ECO:0000313|EMBL:CCD83905.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
sulfate transporter; K03321 sulfate permease, SulP family
SCNpilot_cont_300_bf_scaffold_911_curated_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9081..10076
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037BD24F
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_911_curated_9
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10153..10668
DNA (516bp) protein (172aa)
C4-dicarboxylate ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036D9B25
Uncharacterized protein {ECO:0000313|EMBL:EJZ32670.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_911_curated_10
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10665..11984
DNA (1320bp) protein (440aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI0003826E56
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EIG57684.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_911_curated_11
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12018..12569)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A276_RHIFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE95166.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
SCNpilot_cont_300_bf_scaffold_911_curated_12
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12772..13707)
DNA (936bp) protein (312aa)
2-nitropropane dioxygenase; K02371 enoyl-[acyl carrier protein] reductase II [EC:1.3.1.-]
2-nitropropane dioxygenase NPD n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQM0_PARL1
2-nitropropane dioxygenase NPD {ECO:0000313|EMBL:ABS62203.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_300_bf_scaffold_911_curated_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13740..15302)
DNA (1563bp) protein (521aa)
TAP domain protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AGC6_AZOBR
TAP domain protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_911_curated_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15391..16644
DNA (1254bp) protein (418aa)
Major facilitator superfamily MFS_1 n=2 Tax=Thauera RepID=C4ZJI2_THASP
major facilitator superfamily protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_911_curated_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16647..16778
DNA (132bp) protein (44aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_911_curated_16
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16854..20822
DNA (3969bp) protein (1323aa)
Uncharacterized protein n=1 Tax=Bacillus cereus BAG1O-3 RepID=S3IBM2_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EPF11113.1}; TaxID=1053169 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG1O-3.;"
SCNpilot_cont_300_bf_scaffold_911_curated_17
unknown

Not on your lists

20827..21825
DNA (999bp) protein (333aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_911_curated_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21958..23268)
DNA (1311bp) protein (437aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=HSLU_RHOCS rbh
hslU; heat shock protein HslVU, ATPase subunit HslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_911_curated_19
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23275..23838)
DNA (564bp) protein (188aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
ATP-dependent protease peptidase subunit; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
ATP-dependent protease subunit HslV n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FTG5_PHAMO
SCNpilot_cont_300_bf_scaffold_911_curated_20
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23972..25228
DNA (1257bp) protein (419aa)
D-amino-acid dehydrogenase; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1]
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI00034AD87F
Amino acid dehydrogenase {ECO:0000313|EMBL:EZQ12606.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
SCNpilot_cont_300_bf_scaffold_911_curated_21
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25239..25631
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002DC830A
Flagellar motor switch protein FliN/FliY {ECO:0000313|EMBL:ERF82895.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_911_curated_22
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25893..26636)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRL9_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61128.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_911_curated_23
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26653..27048
DNA (396bp) protein (132aa)
carboxymuconolactone decarboxylase; K01607 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
4-carboxymuconolactone decarboxylase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B702_PARDP
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCNpilot_cont_300_bf_scaffold_911_curated_24
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27050..28234
DNA (1185bp) protein (395aa)
Probable class-V aminotransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G8X4_SORC5
class-V aminotransferase
Probable class-V aminotransferase {ECO:0000313|EMBL:CAN99083.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_cont_300_bf_scaffold_911_curated_25
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28340..29113
DNA (774bp) protein (258aa)
methylase n=1 Tax=Xanthomonas sacchari RepID=UPI000262B1B0
Methyltransferase type 11 {ECO:0000313|EMBL:KGP01891.1}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_911_curated_26
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29233..30816
DNA (1584bp) protein (528aa)
Tat pathway signal sequence domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A430_9PROT
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EHL98425.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_911_curated_27
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30828..31895
DNA (1068bp) protein (356aa)
adenosine deaminase (EC:3.5.4.4); K01488 adenosine deaminase [EC:3.5.4.4]
Adenosine deaminase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A429_9PROT
Adenosine deaminase {ECO:0000313|EMBL:EHL98424.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
SCNpilot_cont_300_bf_scaffold_911_curated_28
Synechococcus sp. PCC 7002, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(32004..32666)
DNA (663bp) protein (221aa)
msrA; methionine sulfoxide reductase A; K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=32049 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum; quadruplicatum).;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) RepID=B1XM81_SYNP2
SCNpilot_cont_300_bf_scaffold_911_curated_29
Pseudoalteromonas lipolytica, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32755..33141
DNA (387bp) protein (129aa)
Inner membrane protein yecN n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MLS8_CORCM
Glutathione metabolism protein {ECO:0000313|EMBL:EWH07131.1}; TaxID=1452721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas lipolytica SCSIO 04301.;"
yecN; inner membrane protein yecN; K07136
SCNpilot_cont_300_bf_scaffold_911_curated_30
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33191..34060
DNA (870bp) protein (290aa)
ribonuclease BN n=1 Tax=Rhizobium loti RepID=UPI00036D7F0A
Ribonuclease BN {ECO:0000313|EMBL:KJB90761.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
putative ribonuclease BN; K07058 membrane protein
Displaying items 1-30 of 33 in total

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