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SCNpilot_cont_300_bf_scaffold_2982_curated

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2982_curated_1
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..264)
DNA (264bp) protein (88aa)
Regulatory protein IclR n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRC4_PARL1
Transcriptional regulator {ECO:0000313|EMBL:ETR78341.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
DNA-binding transcriptional activator MhpR; K05818 IclR family transcriptional regulator, mhp operon transcriptional activator
SCNpilot_cont_300_bf_scaffold_2982_curated_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

366..1205
DNA (840bp) protein (280aa)
dioxygenase; K03119 taurine dioxygenase [EC:1.14.11.17]
Dioxygenase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DKZ0_BRAJP
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2982_curated_3
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1209..2189
DNA (981bp) protein (327aa)
Protein bugT-like protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q1T3_ACIAP
protein bugT-like protein
Protein bugT-like protein {ECO:0000313|EMBL:ADX47725.1}; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
SCNpilot_cont_300_bf_scaffold_2982_curated_4
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2204..2920)
DNA (717bp) protein (239aa)
Putative short chain dehydrogenase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SBQ9_METPP
short chain dehydrogenase
Putative short chain dehydrogenase {ECO:0000313|EMBL:ABM92998.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
SCNpilot_cont_300_bf_scaffold_2982_curated_5
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3002..3580)
DNA (579bp) protein (193aa)
TetR family transcriptional regulator n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UK52_MYXSD
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AGC48383.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
SCNpilot_cont_300_bf_scaffold_2982_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3636..4058)
DNA (423bp) protein (141aa)
Aminoglycoside 6'-N-acetyltransferase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98EC3_RHILO
aminoglycoside 6'-N-acetyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2982_curated_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4055..4594)
DNA (540bp) protein (180aa)
Regulatory protein, TetR n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3THY1_TISMK
lmrA; regulatory protein TetR
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2982_curated_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4654..5877
DNA (1224bp) protein (408aa)
cytochrome P450; K00517 [EC:1.14.-.-]
Cytochrome P450 n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13F58_RHOPS
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2982_curated_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5886..6896
DNA (1011bp) protein (337aa)
zinc-binding dehydrogenase; K00344 NADPH2:quinone reductase [EC:1.6.5.5]
Quinone oxidoreductase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HVI3_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2982_curated_10
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7001..7402
DNA (402bp) protein (134aa)
Blr4238 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89MF5_BRADU
hypothetical protein
Blr4238 protein {ECO:0000313|EMBL:BAC49503.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_cont_300_bf_scaffold_2982_curated_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7399..8097)
DNA (699bp) protein (233aa)
maleate cis-trans isomerase (EC:5.2.1.1); K01799 maleate isomerase [EC:5.2.1.1]
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000372D4FF
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2982_curated_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8215..8577)
DNA (363bp) protein (121aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2982_curated_13
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8590..9372)
DNA (783bp) protein (261aa)
Alpha/beta hydrolase fold n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQL2_PARL1
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ABS62195.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_300_bf_scaffold_2982_curated_14
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9369..10604)
DNA (1236bp) protein (412aa)
Luciferase family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQL3_PARL1
luciferase family protein
Luciferase family protein {ECO:0000313|EMBL:ABS62196.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_300_bf_scaffold_2982_curated_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10670..11500)
DNA (831bp) protein (277aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VQH8_RHOPX
enoyl-CoA hydratase/isomerase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2982_curated_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11555..12598
DNA (1044bp) protein (348aa)
threonine aldolase (EC:4.1.2.5); K01620 threonine aldolase [EC:4.1.2.5]
Threonine aldolase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C393_NITHN
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2982_curated_17
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12657..13508
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000377AE32
Uncharacterized protein {ECO:0000313|EMBL:KJC61938.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2982_curated_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13505..15787
DNA (2283bp) protein (761aa)
coxL; carbon monoxide dehydrogenase (EC:1.2.99.2)
carbon-monoxide dehydrogenase n=1 Tax=Burkholderia kururiensis RepID=UPI00034943D3
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2982_curated_19
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15984..16964
DNA (981bp) protein (327aa)
Uncharacterized protein UPF0065 n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46U79_CUPPJ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
SCNpilot_cont_300_bf_scaffold_2982_curated_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17120..18124)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GNQ2_PUSST
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2982_curated_21
Polynucleobacter necessarius, Polynucleobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18479..19492
DNA (1014bp) protein (338aa)
Patatin n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) RepID=A4T0K7_POLSQ
patatin; K07001 NTE family protein
Patatin {ECO:0000313|EMBL:ABP35271.1}; Flags: Precursor;; TaxID=312153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter.;" source="Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 /; CIP 109841 / QLW-P1DMWA-1).;"
Displaying 21 items

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