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SCNpilot_cont_300_bf_scaffold_2883_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2883_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..390)
DNA (390bp) protein (130aa)
Acetyl-CoA C-acyltransferase; K00632 acetyl-CoA acyltransferase [EC:2.3.1.16]
Acetyl-CoA C-acetyltransferase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QKL8_BREDI
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:EKY28481.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCNpilot_cont_300_bf_scaffold_2883_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(395..1246)
DNA (852bp) protein (284aa)
Retinal pigment epithelial membrane protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QL88_BREDI
Retinal pigment epithelial membrane protein {ECO:0000313|EMBL:EKY28480.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
9-cis-epoxycarotenoid dioxygenase; K11159 carotenoid cleavage dioxygenase
SCNpilot_cont_300_bf_scaffold_2883_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1218..1796)
DNA (579bp) protein (193aa)
Retinal pigment epithelial membrane protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QL88_BREDI
Retinal pigment epithelial membrane protein {ECO:0000313|EMBL:EKY28480.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
carotenoid cleavage dioxygenase; K11159 carotenoid cleavage dioxygenase
SCNpilot_cont_300_bf_scaffold_2883_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1888..2787)
DNA (900bp) protein (300aa)
D-domain protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QKF9_BREDI
D-domain protein {ECO:0000313|EMBL:EKY28479.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
short-chain dehydrogenase
SCNpilot_cont_300_bf_scaffold_2883_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2784..3764)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QKI4_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY28478.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2883_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3887..5959
DNA (2073bp) protein (691aa)
TonB-dependent receptor n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QLM5_BREDI
TonB-dependent receptor {ECO:0000313|EMBL:EKY28477.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
TonB-dependent receptor
SCNpilot_cont_300_bf_scaffold_2883_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6146..7066)
DNA (921bp) protein (307aa)
Transcriptional regulator, HxlR family n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QKL2_BREDI
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:EKY28476.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
HxlR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2883_curated_8
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7728..8528
DNA (801bp) protein (267aa)
Helix-turn-helix-domain containing protein AraC type n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X8D5_OCHA4
helix-turn-helix domain-containing protein
Helix-turn-helix-domain containing protein AraC type {ECO:0000313|EMBL:ABS17489.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_300_bf_scaffold_2883_curated_9
unknown

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comp(10897..11493)
DNA (597bp) protein (199aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2883_curated_10
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14041..15909
DNA (1869bp) protein (623aa)
Autotransporter n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GVT6_PUSST
autotransporter
Autotransporter {ECO:0000313|EMBL:AEC18768.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
SCNpilot_cont_300_bf_scaffold_2883_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16761..17045
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QXN3_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95731.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_2883_curated_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17145..17501
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QXN2_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95730.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_2883_curated_13
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17528..17935
DNA (408bp) protein (136aa)
Putative membrane protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QXN1_BREDI
Putative membrane protein {ECO:0000313|EMBL:EGF95729.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
Displaying 13 items

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