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SCNpilot_cont_300_bf_scaffold_9048_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_9048_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..117)
DNA (117bp) protein (39aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Methionine aminopeptidase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QEY0_BREDI
SCNpilot_cont_300_bf_scaffold_9048_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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269..1039
DNA (771bp) protein (257aa)
Putative molybdopterin binding domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R129_BREDI
Putative molybdopterin binding domain protein {ECO:0000313|EMBL:EGF96161.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
molybdopterin binding domain-containing protein
SCNpilot_cont_300_bf_scaffold_9048_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1221..2525
DNA (1305bp) protein (435aa)
Outer membrane protein transport protein, Ompp1/FadL/TodX family n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QEU2_BREDI
Outer membrane protein transport protein, Ompp1/FadL/TodX family {ECO:0000313|EMBL:EKY26498.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
membrane protein involved in aromatic hydrocarbon degradation; K06076 long-chain fatty acid transport protein
SCNpilot_cont_300_bf_scaffold_9048_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2699..4192)
DNA (1494bp) protein (498aa)
DEAD/DEAH box helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Putative ATP-dependent RNA helicase rhlE n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R128_BREDI
Putative ATP-dependent RNA helicase rhlE {ECO:0000313|EMBL:EGF96160.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_9048_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4472..5119)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R127_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF96159.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_9048_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5177..6292)
DNA (1116bp) protein (372aa)
Rieske 2Fe-2S domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R126_BREDI
Rieske 2Fe-2S domain protein {ECO:0000313|EMBL:EGF96158.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Rieske (2Fe-2S) iron-sulfur domain-containing protein
SCNpilot_cont_300_bf_scaffold_9048_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6356..7300
DNA (945bp) protein (315aa)
Alpha/beta hydrolase fold family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R125_BREDI
Alpha/beta hydrolase fold family protein {ECO:0000313|EMBL:EGF96157.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
alpha/beta hydrolase
SCNpilot_cont_300_bf_scaffold_9048_curated_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7297..7917
DNA (621bp) protein (207aa)
Methyltransferase domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R124_BREDI
Methyltransferase domain protein {ECO:0000313|EMBL:EGF96156.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
type 12 methyltransferase
SCNpilot_cont_300_bf_scaffold_9048_curated_9
unknown

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comp(7872..8006)
DNA (135bp) protein (45aa)

This feature has no annotations

Displaying 9 items

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