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SCNpilot_cont_300_bf_scaffold_5239_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_5239_curated_1
unknown

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comp(2..76)
-----------------
DNA (75bp)
protein (25aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5239_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(198..1997)
-----------------
DNA (1800bp)
protein (600aa)
Protease 4 {ECO:0000256|PIRNR:PIRNR001217}; EC=3.4.21.- {ECO:0000256|PIRNR:PIRNR001217};; Endopeptidase IV {ECO:0000256|PIRNR:PIRNR001217}; Protease IV {ECO:0000256|PIRNR:PIRNR001217}; Signal peptide peptidase {ECO:0000256|PIRNR:PIRNR001217}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
signal peptide peptidase SppA, 67K type; K04773 protease IV [EC:3.4.21.-]
Signal peptide peptidase SppA n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q6C1_BREDI
SCNpilot_cont_300_bf_scaffold_5239_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2149..2907)
-----------------
DNA (759bp)
protein (253aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWH4_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95378.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein; K09807 hypothetical protein
SCNpilot_cont_300_bf_scaffold_5239_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3695..4366
-----------------
DNA (672bp)
protein (224aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWI0_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95384.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5239_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4412..4906
-----------------
DNA (495bp)
protein (165aa)
GAF domain protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QL78_BREDI
GAF domain protein {ECO:0000313|EMBL:EKY28297.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
GAF sensor protein; K07170 GAF domain-containing protein
SCNpilot_cont_300_bf_scaffold_5239_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4906..5799
-----------------
DNA (894bp)
protein (298aa)
ROK family protein; K00847 fructokinase [EC:2.7.1.4]
Fructokinase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QK14_BREDI
Fructokinase {ECO:0000313|EMBL:EKY28298.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCNpilot_cont_300_bf_scaffold_5239_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5863..6540
-----------------
DNA (678bp)
protein (226aa)
Short chain dehydrogenase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWI1_BREDI
Short chain dehydrogenase family protein {ECO:0000313|EMBL:EGF95385.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_300_bf_scaffold_5239_curated_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6540..7358
-----------------
DNA (819bp)
protein (273aa)
Citrate lyase subunit beta {ECO:0000313|EMBL:EGF95386.1}; EC=4.1.3.6 {ECO:0000313|EMBL:EGF95386.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Citryl-CoA lyase (EC:4.1.3.34); K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34]
Citrate lyase subunit beta n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWI2_BREDI
SCNpilot_cont_300_bf_scaffold_5239_curated_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7489..8730
-----------------
DNA (1242bp)
protein (414aa)
WcbA n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWI3_BREDI
WcbA {ECO:0000313|EMBL:EGF95387.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
capsule polysaccharide biosynthesis protein; K07266 capsular polysaccharide export protein
Displaying 9 items

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