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SCNpilot_cont_300_bf_scaffold_2260_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2260_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..735)
DNA (735bp) protein (245aa)
Efflux pump membrane protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QGC5_BREDI
Efflux pump membrane protein {ECO:0000313|EMBL:EKY27059.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
secretion protein HlyD; K03543 multidrug resistance protein A
SCNpilot_cont_300_bf_scaffold_2260_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

873..1637
DNA (765bp) protein (255aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18]
Endonuclease III n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QHE5_BREDI
SCNpilot_cont_300_bf_scaffold_2260_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1640..2530)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0F1_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF96086.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
transporter
SCNpilot_cont_300_bf_scaffold_2260_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2604..3713
DNA (1110bp) protein (370aa)
PfkB family carbohydrate kinase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0F2_BREDI
PfkB family carbohydrate kinase family protein {ECO:0000313|EMBL:EGF96087.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
PfkB domain-containing protein
SCNpilot_cont_300_bf_scaffold_2260_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3783..4502
DNA (720bp) protein (240aa)
Heme exporter protein C n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0F3_BREDI
Heme exporter protein C {ECO:0000313|EMBL:EGF96088.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
heme exporter protein CcmC; K02195 heme exporter protein C
SCNpilot_cont_300_bf_scaffold_2260_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4515..4667
DNA (153bp) protein (51aa)
Heme exporter protein CcmD n=2 Tax=Brevundimonas diminuta RepID=F4R0F4_BREDI
Heme exporter protein CcmD {ECO:0000313|EMBL:EGF96089.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
heme exporter protein CcmD; K02196 heme exporter protein D
SCNpilot_cont_300_bf_scaffold_2260_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4664..5227
DNA (564bp) protein (188aa)
Thiol:disulfide interchange protein dsbE n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0F5_BREDI
Thiol:disulfide interchange protein dsbE {ECO:0000313|EMBL:EGF96090.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
periplasmic protein thiol/disulfide oxidoreductase DsbE; K02199 cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
SCNpilot_cont_300_bf_scaffold_2260_curated_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5297..5527
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0F6_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF96091.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_2260_curated_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5580..6242)
DNA (663bp) protein (221aa)
MarR family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0F7_BREDI
MarR family protein {ECO:0000313|EMBL:EGF96092.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
MarR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2260_curated_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6552..7196)
DNA (645bp) protein (215aa)
Probable intracellular septation protein A n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0F8_BREDI
Probable intracellular septation protein A {ECO:0000256|HAMAP-Rule:MF_00189, ECO:0000256|SAAS:SAAS00082307}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Intracellular septation protein A; K06190 intracellular septation protein
SCNpilot_cont_300_bf_scaffold_2260_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7202..8278)
DNA (1077bp) protein (359aa)
Signal recognition particle receptor FtsY n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0F9_BREDI
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor
SCNpilot_cont_300_bf_scaffold_2260_curated_12
unknown

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comp(9290..9568)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Frankia sp. BCU110501 RepID=UPI00036C3FAE
SCNpilot_cont_300_bf_scaffold_2260_curated_13
unknown

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comp(10044..10295)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2260_curated_14
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10419..11021
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QGJ8_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY27098.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2260_curated_15
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11132..11257
DNA (126bp) protein (42aa)
PhnA protein; K06193 phosphonoacetate hydrolase [EC:3.11.1.2]
PhnA family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0G3_BREDI
PhnA family protein {ECO:0000313|EMBL:EGF96098.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_2260_curated_16
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11307..11666)
DNA (360bp) protein (120aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QGM1_BREDI
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EKY27096.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
alpha/beta hydrolase
Displaying 16 items

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