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SCNpilot_cont_300_bf_scaffold_3240_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3240_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..498)
-----------------
DNA (498bp)
protein (166aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUX4_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96403.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3240_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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658..1629
-----------------
DNA (972bp)
protein (324aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QBC0_BREDI
SCNpilot_cont_300_bf_scaffold_3240_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1664..2119
-----------------
DNA (456bp)
protein (152aa)
Glutamate uptake regulatory protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUX2_BREDI
Glutamate uptake regulatory protein {ECO:0000313|EMBL:EGF96401.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
AsnC family transcriptional regulator; K05800 Lrp/AsnC family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_3240_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2230..2469
-----------------
DNA (240bp)
protein (80aa)
Type 1 capsular polysaccharide biosynthesis protein J n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUX1_BREDI
Type 1 capsular polysaccharide biosynthesis protein J {ECO:0000313|EMBL:EGF96400.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3240_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2517..3719)
-----------------
DNA (1203bp)
protein (401aa)
nitric oxide dioxygenase; K05916 nitric oxide dioxygenase [EC:1.14.12.17]
Flavohemoprotein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUX0_BREDI
Flavohemoprotein {ECO:0000256|HAMAP-Rule:MF_01252}; Flavohemoglobin {ECO:0000256|HAMAP-Rule:MF_01252}; Hemoglobin-like protein {ECO:0000256|HAMAP-Rule:MF_01252}; Nitric oxide dioxygenase {ECO:0000256|HAMAP-Rule:MF_01252}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_3240_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3775..4104)
-----------------
DNA (330bp)
protein (110aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUW9_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96398.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3240_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4229..4654
-----------------
DNA (426bp)
protein (142aa)
Rrf2 family protein transcriptional regulator family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUW8_BREDI
Rrf2 family protein transcriptional regulator family protein {ECO:0000313|EMBL:EGF96397.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
BadM/Rrf2 family transcriptional regulator; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
SCNpilot_cont_300_bf_scaffold_3240_curated_8
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4730..5701
-----------------
DNA (972bp)
protein (324aa)
Fis family transcriptional regulator n=1 Tax=alpha proteobacterium L41A RepID=UPI00037F32A8
GAF domain protein {ECO:0000313|EMBL:EDX79417.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
Fis family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_3240_curated_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5850..6419
-----------------
DNA (570bp)
protein (190aa)
Acetaldehyde dehydrogenase 2 {ECO:0000313|EMBL:EGF96396.1}; EC=1.2.1.3 {ECO:0000313|EMBL:EGF96396.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
Acetaldehyde dehydrogenase 2 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUW7_BREDI
Displaying 9 items

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