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SCNpilot_cont_300_bf_scaffold_1027_curated

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1027_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..524
DNA (522bp) protein (174aa)
Outer membrane efflux family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWS1_BREDI
Outer membrane efflux family protein {ECO:0000313|EMBL:EGF95475.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
outer membrane protein
SCNpilot_cont_300_bf_scaffold_1027_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

521..1588
DNA (1068bp) protein (356aa)
HlyD family secretion family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWS2_BREDI
HlyD family secretion family protein {ECO:0000313|EMBL:EGF95476.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
multidrug resistance efflux pump
SCNpilot_cont_300_bf_scaffold_1027_curated_3
unknown

Not on your lists

comp(1881..2489)
DNA (609bp) protein (203aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1027_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3910..4689)
DNA (780bp) protein (260aa)
Short chain dehydrogenase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWS4_BREDI
Short chain dehydrogenase family protein {ECO:0000313|EMBL:EGF95478.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
short-chain alcohol dehydrogenase-like protein
SCNpilot_cont_300_bf_scaffold_1027_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4733..5464)
DNA (732bp) protein (244aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hydroxyacylglutathione hydrolase; K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6]
Hydroxyacylglutathione hydrolase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWS5_BREDI
SCNpilot_cont_300_bf_scaffold_1027_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5568..6338
DNA (771bp) protein (257aa)
Methyltransferase domain protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q9M3_BREDI
Methyltransferase domain protein {ECO:0000313|EMBL:EKY24658.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
type 11 methyltransferase
SCNpilot_cont_300_bf_scaffold_1027_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6349..6843
DNA (495bp) protein (165aa)
phosphohistidine phosphatase SixA; K08296 phosphohistidine phosphatase [EC:3.1.3.-]
Putative phosphohistidine phosphatase SixA n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q9L3_BREDI
Putative phosphohistidine phosphatase SixA {ECO:0000313|EMBL:EKY24659.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCNpilot_cont_300_bf_scaffold_1027_curated_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6840..7193
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWS7_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95481.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1027_curated_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7196..8233
DNA (1038bp) protein (346aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|SAAS:SAAS00054567}; EC=1.3.-.- {ECO:0000256|SAAS:SAAS00276934};; EC=1.3.5.2 {ECO:0000256|SAAS:SAAS00084821};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
dihydroorotate dehydrogenase (EC:1.3.3.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
Dihydroorotate oxidase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWS8_BREDI
SCNpilot_cont_300_bf_scaffold_1027_curated_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8257..10185
DNA (1929bp) protein (643aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWS9_BREDI
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein {ECO:0000313|EMBL:EGF95483.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
integral membrane sensor hybrid histidine kinase
SCNpilot_cont_300_bf_scaffold_1027_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10182..10562)
DNA (381bp) protein (127aa)
DNA G:T-mismatch repair endonuclease; K07458 DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Very short patch repair protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWT0_BREDI
Very short patch repair protein {ECO:0000313|EMBL:EGF95484.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_1027_curated_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10625..11113)
DNA (489bp) protein (163aa)
Redoxin family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWT1_BREDI
Redoxin family protein {ECO:0000313|EMBL:EGF95485.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
redoxin
SCNpilot_cont_300_bf_scaffold_1027_curated_13
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11248..11817
DNA (570bp) protein (190aa)
UPF0301 protein BDIM_23250 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWT2_BREDI
UPF0301 protein BDIM_23250 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein; K07735 putative transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1027_curated_14
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11834..12829)
DNA (996bp) protein (332aa)
Beta-lactamase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWT3_BREDI
Beta-lactamase family protein {ECO:0000313|EMBL:EGF95487.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
beta-lactamase
SCNpilot_cont_300_bf_scaffold_1027_curated_15
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13009..14682)
DNA (1674bp) protein (558aa)
Diguanylate cyclase GGDEF domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWT4_BREDI
Diguanylate cyclase GGDEF domain protein {ECO:0000313|EMBL:EGF95488.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
diguanylate cyclase/phosphodiesterase
SCNpilot_cont_300_bf_scaffold_1027_curated_16
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14679..15299)
DNA (621bp) protein (207aa)
ribosomal-protein-alanine N-acetyltransferase (EC:2.3.1.128); K03790 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128]
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWT5_BREDI
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EGF95489.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_1027_curated_17
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15346..16581)
DNA (1236bp) protein (412aa)
Peptidase M16 inactive domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWT6_BREDI
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:EGF95490.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
peptidase M16 domain-containing protein
SCNpilot_cont_300_bf_scaffold_1027_curated_18
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16616..17341)
DNA (726bp) protein (242aa)
SURF1 family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWT7_BREDI
SURF1 family protein {ECO:0000313|EMBL:EGF95491.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Surfeit locus 1 family protein
SCNpilot_cont_300_bf_scaffold_1027_curated_19
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17338..17766)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QAC2_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY24670.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1027_curated_20
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17763..18062)
DNA (300bp) protein (100aa)
Cytochrome c oxidase subunit 3 {ECO:0000313|EMBL:EGF95493.1}; EC=1.9.3.1 {ECO:0000313|EMBL:EGF95493.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
cytochrome c oxidase subunit iii; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1]
Cytochrome c oxidase subunit 3 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWT9_BREDI
SCNpilot_cont_300_bf_scaffold_1027_curated_21
unknown

Not on your lists

18247..18375
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1027_curated_22
unknown

Not on your lists

18385..18609
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1027_curated_23
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18684..19259)
DNA (576bp) protein (192aa)
Cytochrome c oxidase assembly protein CtaG n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWU0_BREDI
Cytochrome c oxidase assembly protein CtaG {ECO:0000256|HAMAP-Rule:MF_00155}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
cytochrome c oxidase assembly protein CtaG/Cox11; K02258 cytochrome c oxidase assembly protein subunit 11
SCNpilot_cont_300_bf_scaffold_1027_curated_24
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19265..19525)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWU1_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95495.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_1027_curated_25
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19530..20507)
DNA (978bp) protein (326aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-]
Protoheme IX farnesyltransferase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWU2_BREDI
SCNpilot_cont_300_bf_scaffold_1027_curated_26
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20571..22196)
DNA (1626bp) protein (542aa)
cytochrome c oxidase subunit I; K02274 cytochrome c oxidase subunit I [EC:1.9.3.1]
Cytochrome c oxidase, subunit 1 n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QAC8_BREDI
Cytochrome c oxidase, subunit 1 {ECO:0000313|EMBL:EKY24675.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Displaying 26 items

View Taxonomy