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SCNpilot_cont_300_bf_scaffold_5007_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_5007_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..218
-----------------
DNA (216bp)
protein (72aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
integral membrane sensor signal transduction histidine kinase; K11357 two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3]
Non-motile and phage-resistance protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWJ6_BREDI
SCNpilot_cont_300_bf_scaffold_5007_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(222..845)
-----------------
DNA (624bp)
protein (208aa)
LysE type translocator family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWJ7_BREDI
LysE type translocator family protein {ECO:0000313|EMBL:EGF95401.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
LysE family efflux protein
SCNpilot_cont_300_bf_scaffold_5007_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

950..1390
-----------------
DNA (441bp)
protein (147aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQS6_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY30276.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5007_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1387..2262)
-----------------
DNA (876bp)
protein (292aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QRV0_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY30277.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5007_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2318..2647
-----------------
DNA (330bp)
protein (110aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQI6_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY30278.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5007_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3020..3400
-----------------
DNA (381bp)
protein (127aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWK1_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95405.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5007_curated_7
unknown

Not on your lists

comp(3716..4540)
-----------------
DNA (825bp)
protein (275aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5007_curated_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5074..5214)
-----------------
DNA (141bp)
protein (47aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWK3_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95407.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_5007_curated_9
unknown

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comp(6317..6448)
-----------------
DNA (132bp)
protein (44aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5007_curated_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6961..7338)
-----------------
DNA (378bp)
protein (126aa)
Glucose 1-dehydrogenase 2 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWK5_BREDI
Glucose 1-dehydrogenase 2 {ECO:0000313|EMBL:EGF95409.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
ucpA; short chain dehydrogenase
SCNpilot_cont_300_bf_scaffold_5007_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8533..8895
-----------------
DNA (363bp)
protein (121aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWK7_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95411.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_5007_curated_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9024..10271
-----------------
DNA (1248bp)
protein (416aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QRX3_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY30287.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5007_curated_13
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10357..10707
-----------------
DNA (351bp)
protein (117aa)
Glutaredoxin n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWK8_BREDI
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
glutaredoxin; K07390 monothiol glutaredoxin
SCNpilot_cont_300_bf_scaffold_5007_curated_14
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10713..11138
-----------------
DNA (426bp)
protein (142aa)
thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQM1_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY30289.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCNpilot_cont_300_bf_scaffold_5007_curated_15
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11292..12440)
-----------------
DNA (1149bp)
protein (383aa)
glycyl-tRNA synthetase subunit beta (EC:6.1.1.14); K01879 glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
glycyl-tRNA synthetase subunit beta n=1 Tax=alpha proteobacterium L41A RepID=UPI00036582E4
SCNpilot_cont_300_bf_scaffold_5007_curated_16
unknown

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12963..13280
-----------------
DNA (318bp)
protein (106aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5007_curated_17
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13414..14313)
-----------------
DNA (900bp)
protein (300aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14); K01878 glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
Glycine--tRNA ligase alpha subunit n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWK9_BREDI
SCNpilot_cont_300_bf_scaffold_5007_curated_18
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14425..15162
-----------------
DNA (738bp)
protein (246aa)
Polysaccharide deacetylase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWL0_BREDI
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:EGF95414.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
polysaccharide deacetylase
Displaying 18 items

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