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SCNpilot_cont_300_bf_scaffold_13022_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_13022_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..492
-----------------
DNA (492bp)
protein (164aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0D3_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF96068.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_13022_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(603..1154)
-----------------
DNA (552bp)
protein (184aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0D4_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF96069.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_13022_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1243..1875)
-----------------
DNA (633bp)
protein (211aa)
LysE type translocator family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0D5_BREDI
LysE type translocator family protein {ECO:0000313|EMBL:EGF96070.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
lysine exporter LysE/YggA
SCNpilot_cont_300_bf_scaffold_13022_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1951..2484)
-----------------
DNA (534bp)
protein (178aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0D6_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF96071.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
mucin-associated surface protein (MASP)
SCNpilot_cont_300_bf_scaffold_13022_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2581..2994)
-----------------
DNA (414bp)
protein (138aa)
Translation initiation factor IF-2 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0D7_BREDI
Translation initiation factor IF-2 {ECO:0000313|EMBL:EGF96072.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_13022_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3806..4402
-----------------
DNA (597bp)
protein (199aa)
SMP-30/gluconolaconase/LRE-like region n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0D8_BREDI
SMP-30/gluconolaconase/LRE-like region {ECO:0000313|EMBL:EGF96073.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_13022_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4425..4835)
-----------------
DNA (411bp)
protein (137aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
argininosuccinate synthase (EC:6.3.4.5); K01940 argininosuccinate synthase [EC:6.3.4.5]
Argininosuccinate synthase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QSD0_BREDI
SCNpilot_cont_300_bf_scaffold_13022_curated_8
unknown

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4978..5244
-----------------
DNA (267bp)
protein (89aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_13022_curated_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5847..6506)
-----------------
DNA (660bp)
protein (220aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6]
S-adenosylmethionine synthase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0D9_BREDI
SCNpilot_cont_300_bf_scaffold_13022_curated_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6572..6991)
-----------------
DNA (420bp)
protein (140aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6]
S-adenosylmethionine synthase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0D9_BREDI
SCNpilot_cont_300_bf_scaffold_13022_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7233..8495
-----------------
DNA (1263bp)
protein (421aa)
glutamate dehydrogenase; K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
Glutamate dehydrogenase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0E0_BREDI
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_13022_curated_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8563..8763
-----------------
DNA (201bp)
protein (67aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0E1_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF96076.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Displaying 12 items

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