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SCNpilot_cont_300_bf_scaffold_2329_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2329_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..248)
DNA (246bp) protein (82aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
uridylate kinase (EC:2.7.4.22); K09903 uridylate kinase [EC:2.7.4.22]
Uridylate kinase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R196_BREDI
SCNpilot_cont_300_bf_scaffold_2329_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(300..1238)
DNA (939bp) protein (313aa)
Elongation factor Ts n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R195_BREDI
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
translation elongation factor Ts; K02357 elongation factor Ts
SCNpilot_cont_300_bf_scaffold_2329_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1339..2181)
DNA (843bp) protein (281aa)
30S ribosomal protein S2 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R194_BREDI
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2
SCNpilot_cont_300_bf_scaffold_2329_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2921..3532
DNA (612bp) protein (204aa)
Peptidase family S41 family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R193_BREDI
Peptidase family S41 family protein {ECO:0000313|EMBL:EGF94220.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
carboxy-terminal protease
SCNpilot_cont_300_bf_scaffold_2329_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3589..3897)
DNA (309bp) protein (103aa)
S-(Hydroxymethyl)glutathione synthase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QNN8_BREDI
S-(Hydroxymethyl)glutathione synthase {ECO:0000313|EMBL:EKY29295.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2329_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3897..7367)
DNA (3471bp) protein (1157aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
DNA polymerase III subunit alpha (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]
Putative DNA polymerase III subunit alpha n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QMV5_BREDI
SCNpilot_cont_300_bf_scaffold_2329_curated_7
unknown

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comp(7431..7520)
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2329_curated_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7585..8226)
DNA (642bp) protein (214aa)
Transcriptional regulatory protein fixJ n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R191_BREDI
Transcriptional regulatory protein fixJ {ECO:0000313|EMBL:EGF94218.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
fixJ; transcriptional regulator fixJ; K14987 two-component system, LuxR family, response regulator FixJ
SCNpilot_cont_300_bf_scaffold_2329_curated_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8347..8796
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R190_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94217.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_2329_curated_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8793..9536)
DNA (744bp) protein (248aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
ABC transporter; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-]
ABC transporter family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R189_BREDI
SCNpilot_cont_300_bf_scaffold_2329_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9529..10842)
DNA (1314bp) protein (438aa)
Lipoprotein releasing system, transmembrane protein, LolC/E family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R188_BREDI
Lipoprotein releasing system, transmembrane protein, LolC/E family protein {ECO:0000313|EMBL:EGF94215.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
lipoprotein releasing system, transmembrane protein, LolC/E family; K09808 lipoprotein-releasing system permease protein
SCNpilot_cont_300_bf_scaffold_2329_curated_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10839..11222)
DNA (384bp) protein (128aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01570, ECO:0000256|SAAS:SAAS00010700}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01570, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01570}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15]
Proline--tRNA ligase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R187_BREDI
Displaying 12 items

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