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SCNpilot_cont_300_bf_scaffold_3396_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3396_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..663)
DNA (663bp) protein (221aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5]
RelA/SpoT family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0S7_BREDI
RelA/SpoT family protein {ECO:0000313|EMBL:EGF94950.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_3396_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(723..1082)
DNA (360bp) protein (120aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundim
DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
DNA-directed RNA polymerase subunit omega n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0S8_BREDI
SCNpilot_cont_300_bf_scaffold_3396_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1406..2359
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0T0_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94953.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3396_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2356..3000
DNA (645bp) protein (215aa)
Uracil DNA glycosylase superfamily protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0T1_BREDI
Uracil DNA glycosylase superfamily protein {ECO:0000313|EMBL:EGF94954.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
uracil-DNA glycosylase superfamily protein
SCNpilot_cont_300_bf_scaffold_3396_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3005..4216)
DNA (1212bp) protein (404aa)
cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
N-acetylmuramoyl-L-alanine amidase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0T2_BREDI
N-acetylmuramoyl-L-alanine amidase family protein {ECO:0000313|EMBL:EGF94955.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_3396_curated_6
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4676..4954)
DNA (279bp) protein (93aa)
Ribonuclease E n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DFY8_BRAJP
ribonuclease E
Ribonuclease E {ECO:0000313|EMBL:BAL10762.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_cont_300_bf_scaffold_3396_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5528..7360
DNA (1833bp) protein (611aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
ribonuclease, Rne/Rng family; K08300 ribonuclease E [EC:3.1.26.12]
Ribonuclease E n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0T3_BREDI
SCNpilot_cont_300_bf_scaffold_3396_curated_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7874..8797
DNA (924bp) protein (308aa)
Peptidase family M48 family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0T4_BREDI
Peptidase family M48 family protein {ECO:0000313|EMBL:EGF94957.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
peptidase M48 Ste24p
SCNpilot_cont_300_bf_scaffold_3396_curated_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8841..9659
DNA (819bp) protein (273aa)
DSBA-like thioredoxin domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0T5_BREDI
DSBA-like thioredoxin domain protein {ECO:0000313|EMBL:EGF94958.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
DSBA oxidoreductase
SCNpilot_cont_300_bf_scaffold_3396_curated_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9686..10405)
DNA (720bp) protein (240aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Thiazole synthase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QFS0_BREDI
thiazole biosynthesis protein; K03149 thiamine biosynthesis ThiG
SCNpilot_cont_300_bf_scaffold_3396_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10550..10666)
DNA (117bp) protein (39aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0T7_BREDI
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EGF94960.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
thiamine biosynthesis protein ThiS; K03154 sulfur carrier protein
Displaying 11 items

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