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SCNpilot_cont_300_bf_scaffold_3390_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3390_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..120)
DNA (120bp) protein (40aa)
RNA methyltransferase, TrmH family n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QNB0_BREDI
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EKY29200.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
tRNA/rRNA methyltransferase SpoU; K03437 RNA methyltransferase, TrmH family
SCNpilot_cont_300_bf_scaffold_3390_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(117..1016)
DNA (900bp) protein (300aa)
SAM dependent methyltransferase; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
SAM dependent methyltransferase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2H4_BREDI
SAM dependent methyltransferase {ECO:0000313|EMBL:EGF94419.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_3390_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1033..2454)
DNA (1422bp) protein (474aa)
Glycosyl transferase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2H5_BREDI
Glycosyl transferase family protein {ECO:0000313|EMBL:EGF94420.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3390_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2579..3211
DNA (633bp) protein (211aa)
Bacterial regulatory protein, tetR family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2H6_BREDI
Bacterial regulatory protein, tetR family protein {ECO:0000313|EMBL:EGF94421.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
TetR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_3390_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3208..4002
DNA (795bp) protein (265aa)
Iron compound ABC transporter, periplasmic substrate-binding protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2H7_BREDI
Iron compound ABC transporter, periplasmic substrate-binding protein {ECO:0000313|EMBL:EGF94422.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_3390_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3999..4988
DNA (990bp) protein (330aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QNB5_BREDI
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EKY29205.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
transporter permease; K02015 iron complex transport system permease protein
SCNpilot_cont_300_bf_scaffold_3390_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4985..5749
DNA (765bp) protein (255aa)
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
Putative iron(III) dicitrate ABC transporter, ATP-binding protein FecE n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QMN6_BREDI
Putative iron(III) dicitrate ABC transporter, ATP-binding protein FecE {ECO:0000313|EMBL:EKY29206.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCNpilot_cont_300_bf_scaffold_3390_curated_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5754..6305)
DNA (552bp) protein (184aa)
lytic transglycosylase; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-]
Tetratricopeptide repeat family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2H9_BREDI
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:EGF94424.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Displaying 8 items

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