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SCNpilot_cont_300_bf_scaffold_2600_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2600_curated_1
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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703..1440
DNA (738bp) protein (246aa)
transcriptional regulator n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E0873D
RpiR family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_cont_300_bf_scaffold_2600_curated_2
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1437..2237)
DNA (801bp) protein (267aa)
Hydrolase, haloacid dehydrogenase (HAD) family n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MHD4_9SPHN
Hydrolase, haloacid dehydrogenase (HAD) family {ECO:0000313|EMBL:CCW16625.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
HAD superfamily hydrolase
SCNpilot_cont_300_bf_scaffold_2600_curated_3
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2490..3425
DNA (936bp) protein (312aa)
Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MP09_9SPHN
Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) {ECO:0000313|EMBL:CCW17173.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
phosphate/phosphite/phosphonate ABC transporter periplasmic binding family protein 1; K02044 phosphonate transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_2600_curated_4
unknown

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comp(3464..3667)
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2600_curated_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3855..4202
DNA (348bp) protein (116aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
Putative phosphonate ABC transporter, ATP-binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XDS6_VARPD
putative phosphonate ABC transporter, ATP-binding protein
SCNpilot_cont_300_bf_scaffold_2600_curated_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4192..5214
DNA (1023bp) protein (341aa)
Putative phosphonate ABC transporter, permease protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XDA3_VARPD
putative phosphonate ABC transporter, permease protein
Putative phosphonate ABC transporter, permease protein {ECO:0000313|EMBL:AGU50304.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_2600_curated_7
Asticcacaulis excentricus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5472..7673
DNA (2202bp) protein (734aa)
TonB-dependent receptor plug n=1 Tax=Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48) RepID=E8RQW8_ASTEC
tonb-dependent receptor plug; K02014 iron complex outermembrane recepter protein
TonB-dependent receptor plug {ECO:0000313|EMBL:ADU12231.1}; Flags: Precursor;; TaxID=573065 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 /; CB 48).;"
SCNpilot_cont_300_bf_scaffold_2600_curated_8
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7770..8444
DNA (675bp) protein (225aa)
phosphocholine-specific phospholipase c (EC:3.1.4.3); K01114 phospholipase C [EC:3.1.4.3]
Phospholipase C, phosphocholine-specific n=1 Tax=Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48) RepID=E8RQW6_ASTEC
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Displaying 8 items

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