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SCNpilot_cont_300_bf_scaffold_18_curated

Search features with annotation key words

Displaying items 1-30 of 702 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_18_curated_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..822)
DNA (822bp) protein (274aa)
Cobyrinic acid a,c-diamide synthase n=11 Tax=Proteobacteria RepID=A1W5L4_ACISJ
cobyrinic acid a,c-diamide synthase
Cobyrinic acid-diamide synthase {ECO:0000313|EMBL:BAQ39242.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
SCNpilot_cont_300_bf_scaffold_18_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(865..1077)
DNA (213bp) protein (71aa)
Phage transcriptional regulator, AlpA n=59 Tax=Proteobacteria RepID=A1W5L5_ACISJ
alpA; DNA-binding transcriptional activator; K07733 prophage regulatory protein
Phage-related protein {ECO:0000313|EMBL:EIK90794.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
SCNpilot_cont_300_bf_scaffold_18_curated_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1196..1942)
DNA (747bp) protein (249aa)
Uncharacterized protein n=10 Tax=Proteobacteria RepID=A1W5L6_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETU97050.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
SCNpilot_cont_300_bf_scaffold_18_curated_4
Pseudomonas mosselii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2393..2893
DNA (501bp) protein (167aa)
Uncharacterized protein n=46 Tax=Proteobacteria RepID=A1W5L7_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIN57428.1}; TaxID=1388763 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mosselii SJ10.;"
SCNpilot_cont_300_bf_scaffold_18_curated_5
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3657..4268
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003A73911
Uncharacterized protein {ECO:0000313|EMBL:EPZ14619.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_18_curated_6
Pseudomonas sp. G5(2012), Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4261..5277
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003A7DFF2
Uncharacterized protein {ECO:0000313|EMBL:EPA95366.1}; TaxID=1268068 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. G5(2012).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_18_curated_7
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5441..5815)
DNA (375bp) protein (125aa)
cell division protein Fic n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F4A7AB
hypothetical protein
Tax=RBG_16_Gallionellales_57_15_curated
SCNpilot_cont_300_bf_scaffold_18_curated_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5843..6550
DNA (708bp) protein (236aa)
UPI0003D3FE1B related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003D3FE1B
Uncharacterized protein {ECO:0000313|EMBL:GAO26439.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_18_curated_9
R_Gammaproteobacteria_60_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6726..8393
DNA (1668bp) protein (556aa)
Activation/secretion signal peptide protein n=1 Tax=Achromobacter piechaudii HLE RepID=J4PHJ0_9BURK
activation/secretion signal peptide protein
Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_60_43_curated
SCNpilot_cont_300_bf_scaffold_18_curated_10
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8454..12362
DNA (3909bp) protein (1303aa)
Filamentous hemeagglutinin family domain protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XJP3_9BURK
Filamentous hemeagglutinin family domain protein {ECO:0000313|EMBL:EFF73071.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
Large exoproteins involved in heme utilization or adhesion
SCNpilot_cont_300_bf_scaffold_18_curated_11
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12909..15083
DNA (2175bp) protein (725aa)
TonB-dependent siderophore receptor family protein 20 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HVA5_ACHXA
Ligand-gated channel protein {ECO:0000313|EMBL:KGY26769.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
TonB-dependent siderophore receptor family protein 20
SCNpilot_cont_300_bf_scaffold_18_curated_12
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15264..16109
DNA (846bp) protein (282aa)
ABC transporter related protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KXK0_9BURK
ABC transporter related protein {ECO:0000313|EMBL:EGI75567.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
putative methionine ABC transporter, ATP-binding protein
SCNpilot_cont_300_bf_scaffold_18_curated_13
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16112..16774
DNA (663bp) protein (221aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KXK1_9BURK
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EGI75568.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
putative D-methionine ABC, transporter permease protein
SCNpilot_cont_300_bf_scaffold_18_curated_14
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16834..17643
DNA (810bp) protein (270aa)
Lipoprotein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KXK2_9BURK
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
putative outer membrane lipoprotein; K02073 D-methionine transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_18_curated_15
unknown

Not on your lists

17756..17923
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_18_curated_16
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18061..19155
DNA (1095bp) protein (365aa)
ABC transporter related n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X2T8_OCHA4
ABC transporter; K02052 putative spermidine/putrescine transport system ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ABS15542.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_300_bf_scaffold_18_curated_17
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19199..20164
DNA (966bp) protein (322aa)
Extracellular solute-binding protein family 1 n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KW15_9BURK
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EGI76011.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
extracellular solute-binding protein; K02012 iron(III) transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_18_curated_18
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20243..21907
DNA (1665bp) protein (555aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KW16_9BURK
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EGI76012.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
Ferric iron ABC transporter, permease protein
SCNpilot_cont_300_bf_scaffold_18_curated_19
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21978..22661
DNA (684bp) protein (228aa)
GntR family transcription regulator protein n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CWB6_9BURK
GntR family transcription regulator protein {ECO:0000313|EMBL:EIJ47909.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. GW103.;"
GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_18_curated_20
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22687..24069
DNA (1383bp) protein (461aa)
matA; Malonyl-CoA decarboxylase (EC:4.1.1.9); K01578 malonyl-CoA decarboxylase [EC:4.1.1.9]
Malonyl-CoA decarboxylase n=1 Tax=Ralstonia sp. PBA RepID=I9W3C7_9RALS
Malonyl-CoA decarboxylase {ECO:0000313|EMBL:EIZ02889.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
SCNpilot_cont_300_bf_scaffold_18_curated_21
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24147..25115
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R641_CUPTR
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJK25658.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_18_curated_22
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25115..25957
DNA (843bp) protein (281aa)
enoyl-CoA hydratase/isomerase (EC:4.2.1.17)
enoyl-CoA hydratase n=1 Tax=Cupriavidus sp. WS RepID=UPI000366ADC4
Enoyl-CoA hydratase {ECO:0000313|EMBL:KJK25659.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
SCNpilot_cont_300_bf_scaffold_18_curated_23
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25954..27492
DNA (1539bp) protein (513aa)
Putative Malonyl CoA synthetase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IV26_BORPD
malonyl-CoA synthase
Putative Malonyl CoA synthetase {ECO:0000313|EMBL:CAP43616.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCNpilot_cont_300_bf_scaffold_18_curated_24
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27959..28396
DNA (438bp) protein (146aa)
Putative membrane protein n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MHV1_BORPB
Low affinity iron permease {ECO:0000313|EMBL:KCV66697.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_18_curated_25
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28467..30326
DNA (1860bp) protein (620aa)
Bll6704 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89FJ6_BRADU
hypothetical protein rbh
Bll6704 protein {ECO:0000313|EMBL:BAC51969.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_cont_300_bf_scaffold_18_curated_26
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30433..30885
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003826E6B
Uncharacterized protein {ECO:0000313|EMBL:EGP48389.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
identified by similarity to GB:AAK22812.1; match to protein family HMM PF06676
SCNpilot_cont_300_bf_scaffold_18_curated_27
Bordetella holmesii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31082..31639)
DNA (558bp) protein (186aa)
Elongation factor P n=2 Tax=Bordetella holmesii RepID=M5NKW9_9BORD
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1247649 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella holmesii ATCC 51541.;"
efp; elongation factor P; K02356 elongation factor P
SCNpilot_cont_300_bf_scaffold_18_curated_28
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31771..32871)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HX41_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP43709.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCNpilot_cont_300_bf_scaffold_18_curated_29
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32871..33800)
DNA (930bp) protein (310aa)
LysR family transcriptional regulator n=2 Tax=Pandoraea RepID=V5UFL5_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:AJC23207.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_18_curated_30
Brucella suis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33894..34295
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00036DD491
LrgA family protein; K06518 holin-like protein
Uncharacterized protein {ECO:0000313|EMBL:ENR24263.1}; TaxID=1160233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella suis 92/29.;"
Displaying items 1-30 of 702 in total

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