ggKbase home page

SCNpilot_cont_300_bf_scaffold_204_curated_18

Organism: scnpilot_dereplicated_Burkholderiales_3

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(19367..20629)

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid ABC transporter permease n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0G382_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 407.0
  • Bit_score: 368
  • Evalue 9.80e-99
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EOA03372.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.9
  • Coverage: 407.0
  • Bit_score: 368
  • Evalue 1.40e-98
putative ABC-type branched-chain amino acid transporter, membrane component similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 403.0
  • Bit_score: 365
  • Evalue 2.00e-98

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Herbaspirillum frisingense → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1263
ATGAGCGCCCGTCCCGATGTCAGGCCGTTCCGGGCCTGCGTGGCCGTGGGGCTGGCGGCGCTGGTGCTGGCGCCGCTGTGTTTCGATAGCGGCTTCCAACTGGGCCTGATGTCGCAGATGTGCGCGATGGCACTGTTTGCGCTGTCGTACAACCTGTTGCTGGGCCAGACGGGGATGCTGTCGTTCGGACACGCCGTCTACGCCGGACTGGGCGGGTATGCCGTCATCCACCTCCTGCGCGGGATGGACGGCGGGCCGTTCGTCTTCCCGACCGTGCTGCTGCCCGTGGCGGGCGGGGTGGCGGGCGCGGTCTTCGCCGCGCTGATCGGGTACCCGACCACGCGCCGGGGCGGGACATCCTTCGCGATGATTTCGCTGGCGGTAGGCGAACTGGTCCATGCCGCCGCCGGCATGCTGCCGGAATGGTTCGGCGGGGAGGGCGGGCTGGCGGCCGACCGCACGGCCGGTCCGGCGTTCGTCGTGGGCTTGTGGCCGGGATGGAGCCTGGGACCCGATCTCCACGTCTATTACCTGACCGCGGCATGGACCGCTGCCTGCGTGATCGCCATCCATGGGCTCGGCCGGACGCCGCTGCTCAAGCTTGCCAATGCCGTTCGCGACAATCCGCAGCGCGTGGCCTTCATCGGCTACGACCCGCACCGCGTCCGCTACCTGATGCTGACCTTGTCGGGGTTCTTCGCCGGCGTGGCGGGCGGGTTGATGGCGCTGAACCTGGAGATTGCCAGCGCCGACAGCCTGGGGACGCTCAAATCGGGAGCGGTGCTGCTGGCAGTGGTGGTGGGCGGCAGCGGCCTGTTCCTGGGGCCCGTGGCCGGCGCCGTCGTGGTGACGTTCTTCTCGGTCGAGCTGTCGCGTCATACCGGGGCCTGGCAGTTGTACCTGGGGCTGGCCTTTGCCGCCGTCGTGCTGGCCCTGCCCGGTGGAATGGCCGGGGGCATCCGGGACGCGGCGCGGTTGGTGGCGCGAGGCGAATTGGCGCGCTGGCTGCGCGCCAGGAGATGGACGATCGCCGGCGCGCTGATCGGTATCGCCGGGCTGAGCCTGGCGATCGAGCTGGCCTATGGCCGCGTCCACGACACAGGCGGGCCGGTGGCGGTCTCGTGGTTCGGGCTGGTGCTGGATCCGTCCGCGCCGCTGCCATGGAGTGCGGCTGGCGTGCTATGGGTGCTGGGCGCGGCCGGCCTGTTCCTGGGGCGGGACCGGAGCCGGCCGGAGCGGCCACCGGAGCAATGCGATGCGTGA
PROTEIN sequence
Length: 421
MSARPDVRPFRACVAVGLAALVLAPLCFDSGFQLGLMSQMCAMALFALSYNLLLGQTGMLSFGHAVYAGLGGYAVIHLLRGMDGGPFVFPTVLLPVAGGVAGAVFAALIGYPTTRRGGTSFAMISLAVGELVHAAAGMLPEWFGGEGGLAADRTAGPAFVVGLWPGWSLGPDLHVYYLTAAWTAACVIAIHGLGRTPLLKLANAVRDNPQRVAFIGYDPHRVRYLMLTLSGFFAGVAGGLMALNLEIASADSLGTLKSGAVLLAVVVGGSGLFLGPVAGAVVVTFFSVELSRHTGAWQLYLGLAFAAVVLALPGGMAGGIRDAARLVARGELARWLRARRWTIAGALIGIAGLSLAIELAYGRVHDTGGPVAVSWFGLVLDPSAPLPWSAAGVLWVLGAAGLFLGRDRSRPERPPEQCDA*