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SCNpilot_cont_300_bf_scaffold_498_curated

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_498_curated_1
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..419)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NEI6_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF18722.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_498_curated_2
unknown

Not on your lists

comp(647..940)
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_498_curated_3
unknown

Not on your lists

1139..1759
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI00036FC363
SCNpilot_cont_300_bf_scaffold_498_curated_4
unknown

Not on your lists

1756..2259
DNA (504bp) protein (168aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_498_curated_5
unknown

Not on your lists

3225..3605
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_498_curated_6
unknown

Not on your lists

3689..4438
DNA (750bp) protein (250aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_498_curated_7
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4435..5271
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XQL0_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EHH08201.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;"
SCNpilot_cont_300_bf_scaffold_498_curated_8
unknown

Not on your lists

5268..5582
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_498_curated_9
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5883..6332
DNA (450bp) protein (150aa)
AIG2 family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGZ4_PELHB
AIG2 family protein {ECO:0000313|EMBL:KFC71739.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
AIG2 family protein
SCNpilot_cont_300_bf_scaffold_498_curated_10
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6341..7081
DNA (741bp) protein (247aa)
Metal-dependent hydrolase {ECO:0000313|EMBL:CDP53885.1}; EC=3.-.-.- {ECO:0000313|EMBL:CDP53885.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Putative metal-dependent hydrolase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TTB9_9RHOB
Zn-dependent hydrolases of the beta-lactamase fold-like
SCNpilot_cont_300_bf_scaffold_498_curated_11
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7312..7932
DNA (621bp) protein (207aa)
50S ribosomal protein L21 n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RD68_PHEZH
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21
SCNpilot_cont_300_bf_scaffold_498_curated_12
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7945..8214
DNA (270bp) protein (90aa)
50S ribosomal protein L27 n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=RL27_AZOC5
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27
SCNpilot_cont_300_bf_scaffold_498_curated_13
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8351..9019
DNA (669bp) protein (223aa)
hypothetical protein; K05995 dipeptidase E [EC:3.4.13.21]
Peptidase E n=1 Tax=Rhizobium sp. AP16 RepID=J2DGM4_9RHIZ
Peptidase E {ECO:0000313|EMBL:EJK81977.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
SCNpilot_cont_300_bf_scaffold_498_curated_14
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9019..9663
DNA (645bp) protein (215aa)
50S ribosomal protein acetyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGZ8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB85700.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
50S ribosomal protein acetyltransferase
SCNpilot_cont_300_bf_scaffold_498_curated_15
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9833..10390
DNA (558bp) protein (186aa)
50S ribosomal protein acetyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGZ9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC33471.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
50S ribosomal protein acetyltransferase
SCNpilot_cont_300_bf_scaffold_498_curated_16
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10387..11430
DNA (1044bp) protein (348aa)
GTPase Obg n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RH00_PELHB
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
GTP-binding protein Obg; K03979 GTP-binding protein
SCNpilot_cont_300_bf_scaffold_498_curated_17
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11430..12566
DNA (1137bp) protein (379aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
glutamate 5-kinase; K00931 glutamate 5-kinase [EC:2.7.2.11]
Glutamate 5-kinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RH02_PELHB
SCNpilot_cont_300_bf_scaffold_498_curated_18
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12566..13843
DNA (1278bp) protein (426aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DD
gamma-glutamyl phosphate reductase; K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
Gamma-glutamyl phosphate reductase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RH03_PELHB
SCNpilot_cont_300_bf_scaffold_498_curated_19
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13995..14618
DNA (624bp) protein (208aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
nicotinate-nucleotide adenylyltransferase, NadD family; K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RH04_PELHB
SCNpilot_cont_300_bf_scaffold_498_curated_20
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14823..15209
DNA (387bp) protein (129aa)
Ribosomal silencing factor RsfS n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RH05_PELHB
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
Iojap protein; K09710 ribosome-associated protein
SCNpilot_cont_300_bf_scaffold_498_curated_21
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15247..15726
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
50S m3Psi1915 methyltransferase RlmH; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RH06_PELHB
SCNpilot_cont_300_bf_scaffold_498_curated_22
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15787..16584
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003727458
Glutathione S-transferase family protein {ECO:0000313|EMBL:EYD74069.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
glutathione S-transferase
SCNpilot_cont_300_bf_scaffold_498_curated_23
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16684..18165
DNA (1482bp) protein (494aa)
Peptidase M23B n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RH01_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL25801.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
peptidase M23B
SCNpilot_cont_300_bf_scaffold_498_curated_24
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18172..19536
DNA (1365bp) protein (455aa)
Carboxyl-terminal protease {ECO:0000313|EMBL:CDP53462.1}; EC=3.4.21.102 {ECO:0000313|EMBL:CDP53462.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102]
Carboxyl-terminal protease n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RH07_PELHB
SCNpilot_cont_300_bf_scaffold_498_curated_25
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19693..20847
DNA (1155bp) protein (385aa)
Putative divergent polysaccharide deacetylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R696_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC35038.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
putative divergent polysaccharide deacetylase; K09798 hypothetical protein
SCNpilot_cont_300_bf_scaffold_498_curated_26
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20847..21368
DNA (522bp) protein (174aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298};; (Di)nucleoside polyphosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase; K08311 putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FC2BA4
SCNpilot_cont_300_bf_scaffold_498_curated_27
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21447..22133
DNA (687bp) protein (229aa)
Aspartate racemase {ECO:0000313|EMBL:CDP53466.1}; EC=5.1.1.13 {ECO:0000313|EMBL:CDP53466.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
aspartate racemase; K01779 aspartate racemase [EC:5.1.1.13]
Aspartate racemase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R698_PELHB
SCNpilot_cont_300_bf_scaffold_498_curated_28
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22266..24566)
DNA (2301bp) protein (767aa)
Putative chemotaxis transducer n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R699_PELHB
Putative chemotaxis transducer {ECO:0000313|EMBL:KFC68425.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
putative chemotaxis transducer; K03406 methyl-accepting chemotaxis protein
SCNpilot_cont_300_bf_scaffold_498_curated_29
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24740..26551)
DNA (1812bp) protein (604aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5SZW9_9GAMM
Chemotaxis protein {ECO:0000313|EMBL:KKC35967.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
methyl-accepting chemotaxis protein
SCNpilot_cont_300_bf_scaffold_498_curated_30
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26807..28774)
DNA (1968bp) protein (656aa)
Putative chemotaxis transducer n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R699_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08277.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
putative chemotaxis transducer; K03406 methyl-accepting chemotaxis protein
Displaying items 1-30 of 72 in total

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