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SCNpilot_cont_300_bf_scaffold_1069_curated

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1069_curated_1
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3..329
DNA (327bp) protein (109aa)
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X622_FLAB3
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KFC20462.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
SCNpilot_cont_300_bf_scaffold_1069_curated_2
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

358..831
DNA (474bp) protein (158aa)
nuclease (snase domain-containing protein) n=1 Tax=Pedobacter agri RepID=UPI00029AE1B4
Nuclease {ECO:0000313|EMBL:KFC20463.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
nuclease (snase domain-containing protein)
SCNpilot_cont_300_bf_scaffold_1069_curated_3
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

828..1274
DNA (447bp) protein (149aa)
GCN5-like N-acetyltransferase n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CII7_ELIME
Uncharacterized protein {ECO:0000313|EMBL:KFC20464.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
GCN5-like N-acetyltransferase
SCNpilot_cont_300_bf_scaffold_1069_curated_4
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1380..2387)
DNA (1008bp) protein (336aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01962}; Short=ADE {ECO:0000256|HAMAP-Rule:MF_01962};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01962};; Adenine aminohydrolase {ECO:0000256|HAMAP-Rule:MF_01962}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
Adenosine deaminase n=4 Tax=Riemerella anatipestifer RepID=E4TA92_RIEAD
Adenosine deaminase
SCNpilot_cont_300_bf_scaffold_1069_curated_5
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2469..2717)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W4C8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC22770.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1069_curated_6
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2769..3080)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Riemerella anatipestifer RA-CH-1 RepID=J9QTZ9_RIEAN
Thioredoxin {ECO:0000313|EMBL:KFC22771.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1069_curated_7
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3132..3764)
DNA (633bp) protein (211aa)
alkyl hydroperoxide reductase; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]
Antioxidant, AhpC/TSA family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W4C6_9FLAO
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:KFC22772.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
SCNpilot_cont_300_bf_scaffold_1069_curated_8
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4351..5541)
DNA (1191bp) protein (397aa)
aspartate aminotransferase (EC:2.6.1.1); K00812 aspartate aminotransferase [EC:2.6.1.1]
Aminotransferase, class I/II n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W4C4_9FLAO
Aspartate aminotransferase {ECO:0000313|EMBL:KFC22775.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
SCNpilot_cont_300_bf_scaffold_1069_curated_9
unknown

Not on your lists

comp(5748..5876)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1069_curated_10
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6581..7033
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00037014B3
Uncharacterized protein {ECO:0000313|EMBL:KFC22776.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
ATP-dependent transcriptional regulator, malt-like, luxr family
SCNpilot_cont_300_bf_scaffold_1069_curated_11
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7371..11759
DNA (4389bp) protein (1463aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1T2_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KFC20472.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1069_curated_12
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11863..12498
DNA (636bp) protein (212aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Riemerella anatipestifer RA-CH-1 RepID=J9R716_RIEAN
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1069_curated_13
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12513..12932
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W4C1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC20474.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1069_curated_14
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14821..15900
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CDK4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC22780.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1069_curated_15
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16002..16652)
DNA (651bp) protein (217aa)
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CNI6_ELIME
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:KFC19502.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
SCNpilot_cont_300_bf_scaffold_1069_curated_16
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16796..17368)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EX21_EMTOG
Uncharacterized protein {ECO:0000313|EMBL:KFC22782.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
protein of unknown function DUF1287
SCNpilot_cont_300_bf_scaffold_1069_curated_17
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17506..18756)
DNA (1251bp) protein (417aa)
glutaryl-CoA dehydrogenase (EC:1.3.99.7); K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7]
Acyl-CoA dehydrogenase n=1 Tax=Chryseobacterium sp. CF314 RepID=J2JM95_9FLAO
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KFC19504.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
SCNpilot_cont_300_bf_scaffold_1069_curated_18
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19312..20646
DNA (1335bp) protein (445aa)
Site-specific recombinase, phage integrase family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYC6_9FLAO
Integrase {ECO:0000313|EMBL:KFC17932.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
integrase
SCNpilot_cont_300_bf_scaffold_1069_curated_19
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20738..21913
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI000348F99E
Uncharacterized protein {ECO:0000313|EMBL:AKC17875.1}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1069_curated_20
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21924..22415
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI000373E85A
Uncharacterized protein {ECO:0000313|EMBL:AKC17874.1}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1069_curated_21
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22447..23460
DNA (1014bp) protein (338aa)
Uncharacterized protein n=2 Tax=Myroides odoratimimus RepID=H1GJX6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHO10244.1}; TaxID=883150 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CCUG 10230.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1069_curated_22
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23521..24942
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FUP8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI93381.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1069_curated_23
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24939..26981
DNA (2043bp) protein (681aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FUP7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI93380.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein; K06915
SCNpilot_cont_300_bf_scaffold_1069_curated_24
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27013..28404
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XV14_FLAIG
Uncharacterized protein {ECO:0000313|EMBL:KGO78797.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1069_curated_25
Capnocytophaga cynodegmi, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28461..30128
DNA (1668bp) protein (556aa)
hypothetical protein n=1 Tax=Capnocytophaga cynodegmi RepID=UPI000361564C
Uncharacterized protein {ECO:0000313|EMBL:CEN40165.1}; TaxID=28189 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga cynodegmi.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1069_curated_26
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

30150..30755
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J2Q1_CYCMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEL26634.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
SCNpilot_cont_300_bf_scaffold_1069_curated_27
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30853..31134)
DNA (282bp) protein (94aa)
DNA-binding protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NRD9_9SPHI
DNA-binding protein {ECO:0000313|EMBL:KFC17931.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1069_curated_28
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31131..31427)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYC9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:AIM36918.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1069_curated_29
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31528..31908)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FXT5_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI92297.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1069_curated_30
unknown

Not on your lists

32029..32424
DNA (396bp) protein (132aa)

This feature has no annotations

Displaying 30 items

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