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SCNpilot_cont_300_bf_scaffold_556_curated

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_556_curated_1
unknown

Not on your lists

247..570
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_556_curated_2
unknown

Not on your lists

comp(940..1212)
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_556_curated_3
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1419..3539
DNA (2121bp) protein (707aa)
Prolyl endopeptidase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VX69_9FLAO
Prolyl endopeptidase {ECO:0000313|EMBL:KFC24242.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
prolyl oligopeptidase
SCNpilot_cont_300_bf_scaffold_556_curated_4
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3644..4069
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VW67_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC23686.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
SCNpilot_cont_300_bf_scaffold_556_curated_5
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4093..4566)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CWG4_ELIME
Uncharacterized protein {ECO:0000313|EMBL:BAP29456.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_556_curated_6
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4623..5777
DNA (1155bp) protein (385aa)
Uncharacterized protein n=2 Tax=Elizabethkingia meningoseptica RepID=R9CWS4_ELIME
Uncharacterized protein {ECO:0000313|EMBL:AKH95800.1}; TaxID=1352940 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica FMS-007.;"
SCNpilot_cont_300_bf_scaffold_556_curated_7
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(5850..7391)
DNA (1542bp) protein (514aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
glycyl-tRNA synthetase (EC:6.1.1.14); K01880 glycyl-tRNA synthetase [EC:6.1.1.14]
Glycine--tRNA ligase n=1 Tax=Chryseobacterium sp. CF314 RepID=J2TBY5_9FLAO
SCNpilot_cont_300_bf_scaffold_556_curated_8
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7613..8203)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034A996E
Uncharacterized protein {ECO:0000313|EMBL:KFC23689.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_556_curated_9
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8187..8684)
DNA (498bp) protein (166aa)
Putative RNA polymerase sigma factor n=1 Tax=unidentified eubacterium SCB49 RepID=A6EN70_9BACT
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KFC24211.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
RNA polymerase ECF-type sigma factor, sigma70 superfamily
SCNpilot_cont_300_bf_scaffold_556_curated_10
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8801..9502
DNA (702bp) protein (234aa)
pseudouridine synthase; K06175 tRNA pseudouridine65 synthase [EC:5.4.99.26]
Pseudouridine synthase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVG0_9FLAO
Pseudouridylate synthase {ECO:0000313|EMBL:KFC24210.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
SCNpilot_cont_300_bf_scaffold_556_curated_11
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9571..11859)
DNA (2289bp) protein (763aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X5L7_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KFC23692.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_556_curated_12
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11962..13617)
DNA (1656bp) protein (552aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X5L8_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KFC23693.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_556_curated_13
unknown

Not on your lists

comp(13661..13822)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_556_curated_14
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13886..14896
DNA (1011bp) protein (337aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:0000256|HAMAP-Rule:MF_00225}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
dihydroorotate dehydrogenase 2 (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K630_9FLAO
SCNpilot_cont_300_bf_scaffold_556_curated_15
unknown

Not on your lists

14900..15124
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_556_curated_16
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15176..17521)
DNA (2346bp) protein (782aa)
TonB-denpendent receptor n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0NMG0_ELIME
TonB-dependent receptor {ECO:0000313|EMBL:KFC24233.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
Co/Zn/Cd efflux system membrane fusion protein
SCNpilot_cont_300_bf_scaffold_556_curated_17
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17541..17933)
DNA (393bp) protein (131aa)
Co/Zn/Cd efflux system membrane fusion protein n=2 Tax=Elizabethkingia anophelis RepID=H0KXV3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC23696.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
Co/Zn/Cd efflux system membrane fusion protein
SCNpilot_cont_300_bf_scaffold_556_curated_18
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18061..18432)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KJP1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC24232.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
SCNpilot_cont_300_bf_scaffold_556_curated_19
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18623..19510)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CKZ2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC24231.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_556_curated_20
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19873..21231
DNA (1359bp) protein (453aa)
glutaryl-CoA dehydrogenase; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7]
Glutaryl-CoA dehydrogenase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C3T5_SPHS2
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KFC23699.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
SCNpilot_cont_300_bf_scaffold_556_curated_21
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21329..21868
DNA (540bp) protein (180aa)
methionine-R-sulfoxide reductase; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
Methionine-R-sulfoxide reductase n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CR79_ELIME
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:KFC23700.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
SCNpilot_cont_300_bf_scaffold_556_curated_22
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21939..22688
DNA (750bp) protein (250aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VUQ1_9FLAO
Malonic semialdehyde reductase {ECO:0000313|EMBL:KFC23701.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
short-chain alcohol dehydrogenase
SCNpilot_cont_300_bf_scaffold_556_curated_23
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22694..23122
DNA (429bp) protein (143aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC23702.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
SCNpilot_cont_300_bf_scaffold_556_curated_24
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


23150..23833
DNA (684bp) protein (228aa)
peptidase m22 glycoprotease; K14742 hypothetical protease [EC:3.4.-.-]
Universal bacterial protein YeaZ n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VUQ0_9FLAO
Peptidase M22 {ECO:0000313|EMBL:KFC23704.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
SCNpilot_cont_300_bf_scaffold_556_curated_25
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23838..25037)
DNA (1200bp) protein (400aa)
Glucose/sorbosone dehydrogenase n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CL15_9FLAO
Glucose dehydrogenase {ECO:0000313|EMBL:KFF30094.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
glucose sorbosone dehydrogenase
SCNpilot_cont_300_bf_scaffold_556_curated_26
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25137..25508
DNA (372bp) protein (124aa)
Transcriptional regulator, BlaI/MecI/CopY family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VXD2_9FLAO
Penicillinase repressor {ECO:0000313|EMBL:KFC24251.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
BlaI-like antibiotic resistance-related regulatory protein
SCNpilot_cont_300_bf_scaffold_556_curated_27
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25510..26859
DNA (1350bp) protein (450aa)
Antirepressor regulating drug resistance protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CL39_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC23710.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
BlaR1 peptidase M56
SCNpilot_cont_300_bf_scaffold_556_curated_28
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26947..28938
DNA (1992bp) protein (664aa)
UvrABC system protein B n=1 Tax=Chryseobacterium sp. CF314 RepID=J2T6Q6_9FLAO
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B
SCNpilot_cont_300_bf_scaffold_556_curated_29
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28975..29238)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2SVU8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC24256.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
hypothetical protein; K09954 hypothetical protein
SCNpilot_cont_300_bf_scaffold_556_curated_30
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29242..30333)
DNA (1092bp) protein (364aa)
Putative permease n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CEA9_9FLAO
Permease {ECO:0000313|EMBL:KFC24257.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
hypothetical protein
Displaying items 1-30 of 37 in total

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